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UGID:2810662     UniGene Rn.204345     Rattus norvegicus (Norway rat)   Elk4
ELK4, ETS-domain protein (SRF accessory protein 1) (Elk4)

Norway rat protein-coding gene Elk4. Represented by 185 ESTs from 49 cDNA libraries. Corresponds to reference sequence NM_001107173.2. [UniGene 2810662 - Rn.204345]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001100643.1 Elk4 gene product R. norvegicus 100.0 429
NP_031949.2 Elk4 gene product M. musculus 96.0 429
NP_001964.2 ELK4 gene product H. sapiens 86.1 430
NP_523945.2 Ets at 65A, isoform B D. melanogaster 65.0 80
NP_001086108.1 ELK4, ETS-domain protein (SRF accessory protein 1) X. laevis 61.0 404
NP_571005.1 elk4 gene product D. rerio 54.9 442
Other hits (2 of 34) [Show all]SpeciesId(%)Len(aa)
XP_003893278.1 PREDICTED: ETS domain-containing protein Elk-4, partial P. anubis 86.8 432
XP_001087748.2 PREDICTED: ETS domain-containing protein Elk-4 M. mulatta 86.8 430

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; embryonic tissue; connective tissue; brain; colon; prostate; heart; ovary; lung; uncharacterized tissue; spleen; thymus; liver; placenta; pancreas; kidney; small intestine
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 13
Map position: 13q13
UniSTS entry: RH131651
UniSTS entry: RH139109
UniSTS entry: RH142867
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

NM_001107173.2 Rattus norvegicus ELK4, ETS-domain protein (SRF accessory protein 1) (Elk4), mRNA PA
BC168230.1 Rattus norvegicus ELK4, member of ETS oncogene family, mRNA (cDNA clone MGC:188290 IMAGE:7382659), complete cds PA
FQ234474.1 Rattus norvegicus TL0AEA58YN11 mRNA sequence A
FQ233745.1 Rattus norvegicus TL0AEA60YJ16 mRNA sequence A
FQ233532.1 Rattus norvegicus TL0AEA61YH10 mRNA sequence A

EST sequences (10 of 185) [Show all sequences]

AI072292.1 Clone UI-R-C2-ne-h-03-0-UI mixed 3' read A
AI501741.1 Clone UI-R-C2p-se-e-01-0-UI mixed 3' read PA
AI598880.1 Clone REMDX05 embryonic tissue 3' read
AI407667.1 Clone ROVEC05 ovary 3' read
AI410387.1 Clone RKIDL34 kidney 3' read
AI549125.1 Clone UI-R-C3-tq-h-01-0-UI mixed 3' read A
AW532093.1 Clone UI-R-C4-ali-b-10-0-UI mixed 3' read A
AW534507.1 Clone UI-R-BS0-ans-d-05-0-UI embryonic tissue 3' read A
AW534784.1 Clone UI-R-BS0-anw-b-07-0-UI embryonic tissue 3' read A
AW534807.1 Clone UI-R-BS0-anw-e-07-0-UI embryonic tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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