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UGID:2809439     UniGene Rn.203122     Rattus norvegicus (Norway rat)   Map4
Microtubule-associated protein 4 (Map4)

Norway rat protein-coding gene Map4. Represented by 153 ESTs from 80 cDNA libraries. Corresponds to reference sequence NM_001024278.1. [UniGene 2809439 - Rn.203122]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001019449.1 Map4 gene product R. norvegicus 100.0 1056
NP_032659.2 microtubule-associated protein 4 isoform 2 M. musculus 88.4 1124
NP_002366.2 MAP4 gene product H. sapiens 71.5 1151
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
XP_003309826.2 PREDICTED: uncharacterized protein LOC460339 P. troglodytes 76.0 578
XP_003132223.2 PREDICTED: microtubule-associated protein 4-like S. scrofa 72.7 1125

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; heart; connective tissue; embryonic tissue; mixed; eye; dorsal root ganglion; artery; placenta; prostate; small intestine; colon; adipose tissue; pituitary gland; kidney; lung; testis; uncharacterized tissue; adrenal gland; ovary; pineal gland; spleen; inner ear; liver; thymus; pancreas; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 8
Map position: 8q32
UniSTS entry: RH134553
UniSTS entry: RH130888
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

AB175783.1 Rattus norvegicus MAP4 mRNA for microtubule-associated protein 4 isoform 2, partial cds P
AB175782.1 Rattus norvegicus MAP4 mRNA for microtubule-associated protein 4 isoform 1, partial cds P
BC088405.1 Rattus norvegicus microtubule-associated protein 4, mRNA (cDNA clone MGC:93812 IMAGE:7110394), complete cds PA
NM_001024278.1 Rattus norvegicus microtubule-associated protein 4 (Map4), mRNA PA

EST sequences (10 of 153) [Show all sequences]

H33674.1 Clone RPNAW91 adrenal gland 5' read
H33928.1 Clone RPNBF52 adrenal gland 5' read
H34560.1 Clone RPNCF95 adrenal gland 5' read
AA942811.1 Clone RBRAB21 brain 5' read
AA997946.1 Clone UI-R-C0-ht-e-03-0-UI mixed 3' read A
AI044907.1 Clone UI-R-C1-kk-d-06-0-UI mixed 3' read A
AI071811.1 Clone UI-R-C2-nh-a-12-0-UI mixed 3' read A
AI073127.1 Clone UI-R-Y0-mb-h-06-0-UI eye 3' read A
AI230787.1 Clone REMDB26 embryonic tissue 3' read A
AI703843.1 Clone UI-R-AB1-yy-a-03-0-UI heart 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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