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UGID:1512262     UniGene Rn.138090     Rattus norvegicus (Norway rat)  
Transcribed locus, strongly similar to XP_003640425.1 PREDICTED: histone H3.2-like, partial [Gallus gallus]

Norway rat putative protein-coding gene. Represented by 1 ESTs from 1 cDNA libraries. [UniGene 1512262 - Rn.138090]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_473386.1 histone H3.2 M. musculus 100.0 57
XP_001055051.1 PREDICTED: histone cluster 2, H3c2-like R. norvegicus 100.0 57
XP_002733981.1 PREDICTED: histone cluster 2, H3c2-like, partial S. kowalevskii 100.0 57
XP_001362266.1 PREDICTED: histone H3.2-like M. domestica 100.0 57
XP_003221089.1 PREDICTED: histone H3.2-like A. carolinensis 100.0 57
XP_003392965.1 PREDICTED: histone H3-like B. terrestris 100.0 57
XP_003391250.1 PREDICTED: histone H3-like A. queenslandica 100.0 57
XP_001617711.1 hypothetical protein NEMVEDRAFT_v1g156943 N. vectensis 100.0 57
XP_002193238.1 PREDICTED: similar to predicted protein T. guttata 100.0 57
XP_969677.1 PREDICTED: similar to His3:CG31613 CG31613-PA T. castaneum 100.0 57
NP_001040399.1 histone H3 B. mori 100.0 57
XP_001662236.1 histone H3 A. aegypti 100.0 57
XP_307081.3 Anopheles gambiae str. PEST AGAP012709-PA A. gambiae 100.0 57
XP_001847464.1 histone H3.1t C. quinquefasciatus 100.0 57
NP_724345.1 histone H3 D. melanogaster 100.0 57
XP_002077397.1 GD13199 D. simulans 100.0 57
XP_001608284.1 PREDICTED: histone H3-like N. vitripennis 100.0 57
XP_001120132.1 PREDICTED: histone H3-like A. mellifera 100.0 57
XP_002128382.1 PREDICTED: histone H3-like C. intestinalis 100.0 57
XP_002595683.1 hypothetical protein BRAFLDRAFT_200666 B. floridae 100.0 57
XP_001337584.1 PREDICTED: histone H3.2-like D. rerio 100.0 57
XP_004076082.1 PREDICTED: histone H3.2-like O. latipes 100.0 57
XP_003448794.1 PREDICTED: histone H3.2-like O. niloticus 100.0 57
NP_001091428.1 histone H3.2 X. laevis 100.0 57
XP_002945274.1 PREDICTED: histone H3.2-like, partial X. tropicalis 100.0 57
XP_003640425.1 PREDICTED: histone H3.2-like, partial G. gallus 100.0 57
XP_003202267.1 PREDICTED: histone H3.2-like M. gallopavo 100.0 57
XP_001514728.1 PREDICTED: histone H3.2-like, partial O. anatinus 100.0 57
XP_001084245.1 PREDICTED: histone H3.2-like isoform 1 M. mulatta 100.0 57
XP_003919289.1 PREDICTED: histone H3.2-like P. anubis 100.0 57
XP_524859.2 PREDICTED: histone H3.2-like P. troglodytes 100.0 57
NP_001116847.1 HIST2H3D gene product H. sapiens 100.0 57
XP_001500143.1 PREDICTED: histone H3.2-like E. caballus 100.0 57
XP_003355255.1 PREDICTED: histone H3.2-like S. scrofa 100.0 57
XP_001788836.1 PREDICTED: histone H3.2, partial B. taurus 100.0 57
XP_004002478.1 PREDICTED: histone H3.2-like O. aries 100.0 57
XP_002715686.1 PREDICTED: histone H3-like O. cuniculus 100.0 57
NP_496899.1 Protein HIS-42 C. elegans 98.3 57
NP_189372.1 histone H3 A. thaliana 96.5 57
XP_001690671.1 histone H3 C. reinhardtii 94.8 57
Other hits (2 of 29) [Show all]SpeciesId(%)Len(aa)
XP_003979651.1 PREDICTED: histone H3.2-like T. rubripes 98.3 57
XP_002165755.1 PREDICTED: similar to predicted protein, partial H. magnipapillata 98.3 57

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
cDNA Sources: mixed
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

EST sequences (1)

BI291200.1 Clone UI-R-DK0-cgh-h-09-0-UI mixed 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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