NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy

Query Tips
Build Info
Library Browser
Download UniGene

Related Databases

NIH cDNA Projects
Finding cDNAs

UGID:383024     UniGene Rn.11327     Rattus norvegicus (Norway rat)   Parp1
Poly (ADP-ribose) polymerase 1 (Parp1)

Norway rat protein-coding gene Parp1. Represented by 173 ESTs from 63 cDNA libraries. Corresponds to reference sequence NM_013063.2. [UniGene 383024 - Rn.11327]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_037195.1 Parp1 gene product R. norvegicus 100.0 1013
NP_031441.2 Parp1 gene product M. musculus 98.2 1013
NP_001609.2 PARP1 gene product H. sapiens 94.1 1013
NP_001081571.1 poly [ADP-ribose] polymerase 1 X. laevis 78.9 1006
NP_001038407.1 poly [ADP-ribose] polymerase 1 D. rerio 75.1 1006
NP_001104452.1 Poly-(ADP-ribose) polymerase, isoform B D. melanogaster 50.6 986
XP_960982.2 hypothetical protein NCU08852 N. crassa 47.2 468
NP_850165.1 Poly [ADP-ribose] polymerase 1 A. thaliana 47.0 980
Other hits (2 of 49) [Show all]SpeciesId(%)Len(aa)
XP_001491507.3 PREDICTED: poly [ADP-ribose] polymerase 1 isoform 1 E. caballus 94.5 971
XP_001090984.1 PREDICTED: poly [ADP-ribose] polymerase 1 isoform 4 M. mulatta 94.2 1013

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; heart; embryonic tissue; placenta; dorsal root ganglion; prostate; adipose tissue; connective tissue; lung; kidney; testis; uncharacterized tissue; spleen; brain; liver; thymus; muscle; small intestine; inner ear; pancreas; eye; colon; pituitary gland
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 13
Map position: 13q26
UniSTS entry: RH94656
UniSTS entry: AW535466
UniSTS entry: RH129597
UniSTS entry: RH138341
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

U94340.1 Rattus norvegicus poly(ADP-ribose) polymerase mRNA, complete cds P
NM_013063.2 Rattus norvegicus poly (ADP-ribose) polymerase 1 (Parp1), mRNA PA
BC085765.1 Rattus norvegicus poly (ADP-ribose) polymerase 1, mRNA (cDNA clone MGC:93658 IMAGE:7107130), complete cds PA
FQ232656.1 Rattus norvegicus TL0AEA64YO07 mRNA sequence PA
FQ226329.1 Rattus norvegicus TL0AEA2YI24 mRNA sequence PA

EST sequences (10 of 173) [Show all sequences]

AA925065.1 Clone UI-R-A1-en-g-01-0-UI mixed 3' read A
AA964849.1 Clone UI-R-C0-gx-d-10-0-UI mixed 3' read A
AI111759.1 Clone UI-R-Y0-me-e-01-0-UI eye 3' read A
AI600026.1 Clone REMDO44 embryonic tissue 3' read PA
AI712362.1 Clone UI-R-AF1-aav-f-12-0-UI embryonic tissue 3' read A
AW144795.1 Clone RGICG32 embryonic tissue 5' read P
AW253159.1 Clone UI-R-BJ0-adv-b-09-0-UI heart 3' read A
AW253681.1 Clone UI-R-BJ0-aes-a-12-0-UI heart 3' read A
AW253683.1 Clone UI-R-BJ0-aes-b-03-0-UI heart 3' read A
AW254440.1 Clone UI-R-BJ0-adr-a-11-0-UI heart 3' read A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help