NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy

Query Tips
Build Info
Library Browser
Download UniGene

Related Databases

NIH cDNA Projects
Finding cDNAs

UGID:382966     UniGene Rn.11242     Rattus norvegicus (Norway rat)   Itpr3
Inositol 1,4,5-trisphosphate receptor, type 3 (Itpr3)

Norway rat protein-coding gene Itpr3. Represented by 37 ESTs from 25 cDNA libraries. Corresponds to reference sequence NM_013138.1. [UniGene 382966 - Rn.11242]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_037270.1 Itpr3 gene product R. norvegicus 100.0 2669
NP_542120.2 inositol 1,4,5-trisphosphate receptor type 3 M. musculus 99.1 2669
NP_002215.2 inositol 1,4,5-trisphosphate receptor type 3 H. sapiens 96.4 2670
NP_001084015.1 inositol 1,4,5-trisphosphate receptor, type 1 X. laevis 66.6 2677
XP_001921194.2 PREDICTED: inositol 1,4,5-trisphosphate receptor type 1 D. rerio 65.9 2733
NP_730942.1 inositol 1,4,5,-tris-phosphate receptor, isoform A D. melanogaster 56.7 2810
Other hits (2 of 34) [Show all]SpeciesId(%)Len(aa)
XP_003128393.1 PREDICTED: inositol 1,4,5-trisphosphate receptor type 3 S. scrofa 96.7 2670
XP_538867.4 PREDICTED: inositol 1,4,5-trisphosphate receptor type 3 isoform 1 C. lupus familiaris 96.3 2670

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; prostate; embryonic tissue; connective tissue; eye; dorsal root ganglion; colon; lung; uncharacterized tissue; spleen; placenta; brain; pituitary gland
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 20
Map position: 20p12
UniSTS entry: RH129560
UniSTS entry: RH129567
UniSTS entry: PMC275467P4
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

L06096.1 Rat inositol trisphosphate receptor subtype 3 (IP3R-3) mRNA, complete cds PA
NM_013138.1 Rattus norvegicus inositol 1,4,5-trisphosphate receptor, type 3 (Itpr3), mRNA PA
GQ233031.1 Rattus norvegicus inositol 1,4,5-trisphosphate receptor type 3 (Itpr3) mRNA, complete cds P

EST sequences (10 of 37) [Show all sequences]

AA964716.1 Clone UI-R-C0-gx-e-02-0-UI mixed 3' read A
AA964730.1 Clone UI-R-C0-gx-f-04-0-UI mixed 3' read A
AA998574.1 Clone UI-R-C0-if-d-10-0-UI mixed 3' read A
AI008679.1 Clone REMBB56 embryonic tissue 3' read
AI102650.1 Clone REMBQ58 embryonic tissue 3' read
AI231249.1 Clone REMDH66 embryonic tissue 3' read
AW140814.1 Clone RGIAU70 embryonic tissue 5' read P
AW913933.1 Clone RGIZA27 mixed 5' read P
BF557837.1 Clone UI-R-C0-gx-e-02-0-UI mixed 5' read
BF557846.1 Clone UI-R-C0-gx-f-04-0-UI mixed 5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help