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UGID:382132     UniGene Rn.10030     Rattus norvegicus (Norway rat)   Akr1c3
Aldo-keto reductase family 1, member C3 (Akr1c3)

Norway rat protein-coding gene Akr1c3. Represented by 35 ESTs from 4 cDNA libraries. EST representation biased toward ovary; juvenile. Corresponds to reference sequence NM_138510.1. [UniGene 382132 - Rn.10030]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_612519.1 Akr1c3 gene product R. norvegicus 100.0 322
NP_598827.1 Akr1c18 gene product M. musculus 95.4 322
NP_001240837.1 AKR1C3 gene product H. sapiens 76.5 322
NP_001092160.1 uncharacterized protein LOC100049750 X. laevis 66.2 313
NP_648484.1 CG6084, isoform A D. melanogaster 51.9 313
NP_001070715.1 si:dkey-180p18.9 gene product D. rerio 50.0 313
NP_001118465.1 NAD(P)-linked oxidoreductase-like protein A. thaliana 46.5 290
Other hits (2 of 37) [Show all]SpeciesId(%)Len(aa)
XP_001104543.1 PREDICTED: aldo-keto reductase family 1 member C3 homolog isoform 2 M. mulatta 76.8 322
XP_003312483.1 PREDICTED: aldo-keto reductase family 1 member C3 homolog isoform 1 P. troglodytes 76.5 322

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: ovary [show more like this]
juvenile [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: ovary; mixed; uncharacterized tissue
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q12.3
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

L32601.1 Rat 20 alpha-hydroxysteroid dehydrogenase mRNA, complete cds PA
D14424.1 Rattus norvegicus mRNA for 20-alpha-hydroxysteroid dehydrogenase (20-alpha-HSD), complete cds PA
NM_138510.1 Rattus norvegicus aldo-keto reductase family 1, member C3 (Akr1c3), mRNA PA
BC086579.1 Rattus norvegicus aldo-keto reductase family 1, member C18, mRNA (cDNA clone IMAGE:7307445), partial cds PA
BC100248.1 Rattus norvegicus aldo-keto reductase family 1, member C18, mRNA (cDNA clone MGC:116049 IMAGE:7307214), complete cds PA
DQ255903.1 Rattus norvegicus clone G164-8A 20-alpha hydroxysteroid dehydrogenase (Akr1c18) mRNA, partial cds A

EST sequences (10 of 35) [Show all sequences]

AI236010.1 Clone ROVDA18 ovary 3' read PA
AW141998.1 Clone RGICR86 ovary 5' read P
BF411212.1 Clone UI-R-CN0-bmh-d-10-0-UI mixed 3' read PA
CR469344.1 Clone LIONp463E09222 uncharacterized tissue 3' read A
CO392775.1 Clone IMAGE:7309212 ovary 5' read P
CO393852.1 Clone IMAGE:7307638 ovary 5' read P
CO394420.1 Clone IMAGE:7310870 ovary 5' read P
CO394552.1 Clone IMAGE:7309711 ovary 5' read P
CO395613.1 Clone IMAGE:7307338 ovary 5' read P
CO395614.1 Clone IMAGE:7307486 ovary 5' read P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

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