NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:382132     UniGene Rn.10030     Rattus norvegicus (Norway rat)   Akr1c3
Aldo-keto reductase family 1, member C3 (Akr1c3)

Norway rat protein-coding gene Akr1c3. Represented by 35 ESTs from 4 cDNA libraries. EST representation biased toward ovary; juvenile. Corresponds to reference sequence NM_138510.1. [UniGene 382132 - Rn.10030]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_612519.1 Akr1c3 gene product R. norvegicus 100.0 322
NP_598827.1 Akr1c18 gene product M. musculus 95.4 322
NP_001240837.1 AKR1C3 gene product H. sapiens 76.5 322
NP_001092160.1 uncharacterized protein LOC100049750 X. laevis 66.2 313
NP_648484.1 CG6084, isoform A D. melanogaster 51.9 313
NP_001070715.1 si:dkey-180p18.9 gene product D. rerio 50.0 313
NP_001118465.1 NAD(P)-linked oxidoreductase-like protein A. thaliana 46.5 290
Other hits (2 of 37) [Show all]SpeciesId(%)Len(aa)
XP_001104543.1 PREDICTED: aldo-keto reductase family 1 member C3 homolog isoform 2 M. mulatta 76.8 322
XP_003312483.1 PREDICTED: aldo-keto reductase family 1 member C3 homolog isoform 1 P. troglodytes 76.5 322

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: ovary [show more like this]
juvenile [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: ovary; mixed; uncharacterized tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q12.3
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

L32601.1 Rat 20 alpha-hydroxysteroid dehydrogenase mRNA, complete cds PA
D14424.1 Rattus norvegicus mRNA for 20-alpha-hydroxysteroid dehydrogenase (20-alpha-HSD), complete cds PA
NM_138510.1 Rattus norvegicus aldo-keto reductase family 1, member C3 (Akr1c3), mRNA PA
BC086579.1 Rattus norvegicus aldo-keto reductase family 1, member C18, mRNA (cDNA clone IMAGE:7307445), partial cds PA
BC100248.1 Rattus norvegicus aldo-keto reductase family 1, member C18, mRNA (cDNA clone MGC:116049 IMAGE:7307214), complete cds PA
DQ255903.1 Rattus norvegicus clone G164-8A 20-alpha hydroxysteroid dehydrogenase (Akr1c18) mRNA, partial cds A

EST sequences (10 of 35) [Show all sequences]

AI236010.1 Clone ROVDA18 ovary 3' read PA
AW141998.1 Clone RGICR86 ovary 5' read P
BF411212.1 Clone UI-R-CN0-bmh-d-10-0-UI mixed 3' read PA
CR469344.1 Clone LIONp463E09222 uncharacterized tissue 3' read A
CO392775.1 Clone IMAGE:7309212 ovary 5' read P
CO393852.1 Clone IMAGE:7307638 ovary 5' read P
CO394420.1 Clone IMAGE:7310870 ovary 5' read P
CO394552.1 Clone IMAGE:7309711 ovary 5' read P
CO395613.1 Clone IMAGE:7307338 ovary 5' read P
CO395614.1 Clone IMAGE:7307486 ovary 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help