NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:1939118     UniGene Os.74805     Oryza sativa (rice)   Os02g0111700
Os02g0111700 (Os02g0111700)

Rice protein-coding gene Os02g0111700. Represented by 160 ESTs from 49 cDNA libraries. Corresponds to reference sequence NM_001052190.1. [UniGene 1939118 - Os.74805]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001045655.1 Os02g0111700 O. sativa 100.0 93
NP_172977.1 60S ribosomal protein L37-1 A. thaliana 84.0 94
NP_013286.1 Rpl37ap S. cerevisiae 75.6 82
XP_001702514.1 ribosomal protein L37, component of cytosolic 80S ribosome and 60S large subunit C. reinhardtii 74.4 89
NP_080345.1 60S ribosomal protein L37 M. musculus 71.3 94
XP_001335983.1 PREDICTED: 60S ribosomal protein L37-like isoform 1 D. rerio 71.3 94
NP_000988.1 60S ribosomal protein L37 H. sapiens 71.3 94
NP_001085977.1 ribosomal protein L37 X. laevis 70.2 94
NP_573005.1 ribosomal protein L37a D. melanogaster 69.6 92
XP_964330.1 60S ribosomal protein L37 N. crassa 68.5 91
NP_497072.1 Protein W01D2.1 C. elegans 62.0 91
Other hits (2 of 56) [Show all]SpeciesId(%)Len(aa)
XP_002465171.1 hypothetical protein SORBIDRAFT_01g033340 S. bicolor 95.7 93
NP_001151361.1 60S ribosomal protein L37 Z. mays 95.7 93

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: leaf; callus; mixed; flower; stem; root; panicle; whole plant; unspecified tissue; seed
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

AK058280.1 Oryza sativa Japonica Group cDNA clone:001-013-C10, full insert sequence P
NM_001052190.1 Oryza sativa Japonica Group Os02g0111700 (Os02g0111700) mRNA, complete cds P

EST sequences (10 of 160) [Show all sequences]

C73783.1 Clone E20610_1A panicle P
BE230303.1 Clone 99AS656
BE230350.1 Clone 99AS7
AU094694.1 Clone E20610 panicle P
C99405.2 Clone E11515_1Z panicle A
CA755943.1 Clone BR030031000_PLATE_G10_79_083.ab1 root PA
CA999082.1 stem 5' read A
CB000410.1 stem 5' read A
CF298185.1 Clone 7LEAF--01-H12 leaf PA
CF298704.1 Clone 7LEAF--02-E02 leaf PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help