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UGID:359312     UniGene Os.4982     Oryza sativa (rice)   Os02g0103700
Os02g0103700 (Os02g0103700)

Rice protein-coding gene Os02g0103700. Represented by 47 ESTs from 26 cDNA libraries. Corresponds to reference sequence NM_001052142.1. [UniGene 359312 - Os.4982]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001045607.1 Os02g0103700 O. sativa 100.0 191
NP_564417.1 60S ribosomal protein L9-1 A. thaliana 81.4 193
XP_001700532.1 ribosomal protein L9, component of cytosolic 80S ribosome and 60S large subunit C. reinhardtii 69.1 190
NP_001003861.1 60S ribosomal protein L9 D. rerio 64.9 191
NP_001080769.1 ribosomal protein L9 X. laevis 64.4 191
NP_035422.1 60S ribosomal protein L9 M. musculus 64.2 190
NP_000652.2 60S ribosomal protein L9 H. sapiens 64.2 190
NP_011368.1 Rpl9ap S. cerevisiae 62.1 190
NP_477161.1 ribosomal protein L9, isoform A D. melanogaster 61.9 189
XP_965129.1 60S ribosomal protein L9 N. crassa 61.1 192
NP_498660.1 Protein RPL-9 C. elegans 58.9 185
Other hits (2 of 60) [Show all]SpeciesId(%)Len(aa)
XP_002437682.1 hypothetical protein SORBIDRAFT_10g000700 S. bicolor 94.2 189
NP_001150671.1 LOC100284304 Z. mays 92.6 189

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; root; panicle; stem; callus; leaf; whole plant; other; flower; unspecified tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

D38012.1 Oryza sativa Japonica Group mRNA for ribosomal protein L9, partial cds P
AK102186.1 Oryza sativa Japonica Group cDNA clone:J033086N17, full insert sequence P
AK062502.1 Oryza sativa Japonica Group cDNA clone:001-104-A12, full insert sequence P
NM_001052142.1 Oryza sativa Japonica Group Os02g0103700 (Os02g0103700) mRNA, complete cds P

EST sequences (10 of 47) [Show all sequences]

AA751558.1 Clone 96AS0291 other P
AA753559.1 Clone 96BS0800 other PA
AU182742.1 Clone E30158 panicle A
AU092814.1 Clone C53774 callus PA
C98334.1 Clone C1685_16Z callus A
C99447.1 Clone E20044_6Z panicle PA
BP184692.1 Clone 14FPR022 panicle 5' read P
CF325854.1 Clone JMT1--04-G09 leaf P
CV724973.1 Clone 14Salt--01-N06 leaf A
CV726178.1 Clone 14Salt--03-K22 leaf PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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