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UGID:258514     UniGene Mm.7286     Mus musculus (mouse)   Ctbp1
C-terminal binding protein 1 (Ctbp1)

Mouse protein-coding gene Ctbp1. Represented by 383 ESTs from 158 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 258514 - Mm.7286]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_038530.1 C-terminal-binding protein 1 isoform 3 M. musculus 100.0 440
NP_062074.2 Ctbp1 gene product R. norvegicus 100.0 429
XP_001083191.1 PREDICTED: c-terminal-binding protein 1-like isoform 1 M. mulatta 99.5 439
XP_003890963.1 PREDICTED: C-terminal-binding protein 1 isoform 2 P. anubis 99.5 439
NP_001319.1 C-terminal-binding protein 1 isoform 1 H. sapiens 99.5 439
XP_001488362.2 PREDICTED: c-terminal-binding protein 1 E. caballus 99.5 428
NP_001079151.1 C-terminal-binding protein 1 X. laevis 98.6 439
NP_001035480.1 zgc:136929 gene product D. rerio 96.6 439
NP_524336.2 C-terminal binding protein, isoform A D. melanogaster 81.1 375
NP_001257031.1 Protein CTBP-1, isoform b C. elegans 61.8 435
Other hits (2 of 33) [Show all]SpeciesId(%)Len(aa)
XP_001510652.2 PREDICTED: C-terminal-binding protein 1-like isoform 1 O. anatinus 99.3 429
XP_003950313.1 PREDICTED: LOW QUALITY PROTEIN: C-terminal-binding protein 1 P. troglodytes 99.3 428

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; mammary gland; eye; bone marrow; pancreas; intestine; mixed; uncharacterized tissue; skin; thymus; spleen; kidney; muscle; uterus; lung; heart; bone; inner ear; stomach; extraembryonic tissue; liver; thyroid; salivary gland; tongue; connective tissue; blood; ovary; nasopharynx; lymph node
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5 B1|5 17.52 cM
UniSTS entry: RH128943
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (46)

BC042425.1 Mus musculus C-terminal binding protein 1, mRNA (cDNA clone MGC:30529 IMAGE:5005681), complete cds PA
AK219771.1 Mus musculus cDNA, clone:Y2G0149J06, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search P
AK218288.1 Mus musculus cDNA, clone:Y2G0144K19, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search P
AK217104.1 Mus musculus cDNA, clone:Y2G0140K15, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search P
AK216177.1 Mus musculus cDNA, clone:Y2G0137H12, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search
AK215609.1 Mus musculus cDNA, clone:Y2G0135J12, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search P
AK215599.1 Mus musculus cDNA, clone:Y2G0135I23, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000046032, based on BLAT search
AK214870.1 Mus musculus cDNA, clone:Y2G0133E04, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search P
AK213613.1 Mus musculus cDNA, clone:Y2G0128N21, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search P
AK211651.1 Mus musculus cDNA, clone:Y2G0122G22, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000046032, based on BLAT search
AK211088.1 Mus musculus cDNA, clone:Y2G0120J23, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search
AK211006.1 Mus musculus cDNA, clone:Y2G0120F18, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search
AK210217.1 Mus musculus cDNA, clone:Y2G0117L03, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search P
AK207288.1 Mus musculus cDNA, clone:Y2G0107I18, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search
AK206815.1 Mus musculus cDNA, clone:Y2G0106A11, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search
AK205710.1 Mus musculus cDNA, clone:Y2G0102I16, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search P
AK205661.1 Mus musculus cDNA, clone:Y2G0102G09, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search
AK205266.1 Mus musculus cDNA, clone:Y2G0101C22, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000046032, based on BLAT search
AK202764.1 Mus musculus cDNA, clone:Y1G0142K07, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000046032, based on BLAT search
AK195486.1 Mus musculus cDNA, clone:Y1G0118K08, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search P
AK194999.1 Mus musculus cDNA, clone:Y1G0117B06, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000046032, based on BLAT search
AK193970.1 Mus musculus cDNA, clone:Y1G0113O12, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000046032, based on BLAT search
AK193316.1 Mus musculus cDNA, clone:Y1G0111N01, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000046032, based on BLAT search
AK190760.1 Mus musculus cDNA, clone:Y1G0103L12, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000046032, based on BLAT search
AK190732.1 Mus musculus cDNA, clone:Y1G0103K06, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search
AK189146.1 Mus musculus cDNA, clone:Y0G0148A07, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search
AK189066.1 Mus musculus cDNA, clone:Y0G0147K14, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search
AK188829.1 Mus musculus cDNA, clone:Y0G0146J17, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search P
AK183752.1 Mus musculus cDNA, clone:Y0G0127A03, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search P
AK179724.1 Mus musculus cDNA, clone:Y0G0111H17, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search P
AK178530.1 Mus musculus cDNA, clone:Y0G0107B12, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search P
AK177218.1 Mus musculus cDNA, clone:Y0G0102A20, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063670, based on BLAT search
AK133816.1 Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730432P11 product:C-terminal binding protein 1, full insert sequence P
AK165276.1 Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430008B04 product:C-terminal binding protein 1, full insert sequence P
AK149906.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530104I04 product:C-terminal binding protein 1, full insert sequence P
AK170133.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630021B21 product:C-terminal binding protein 1, full insert sequence P
AK171650.1 Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830002F24 product:C-terminal binding protein 1, full insert sequence P
AK160658.1 Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810437G04 product:C-terminal binding protein 1, full insert sequence P
NM_001198861.1 Mus musculus C-terminal binding protein 1 (Ctbp1), transcript variant 4, mRNA PA
NM_001198860.1 Mus musculus C-terminal binding protein 1 (Ctbp1), transcript variant 2, mRNA PA
NM_001198859.1 Mus musculus C-terminal binding protein 1 (Ctbp1), transcript variant 1, mRNA PA
AJ010483.1 Mus musculus mRNA for CtBP1 protein P
AB033122.1 Mus musculus CtBP1 mRNA for C-terminal binding protein 1, complete cds PA
NM_013502.3 Mus musculus C-terminal binding protein 1 (Ctbp1), transcript variant 3, mRNA PA
BC015071.1 Mus musculus C-terminal binding protein 1, mRNA (cDNA clone MGC:13752 IMAGE:4192052), complete cds PA
BC013702.1 Mus musculus C-terminal binding protein 1, mRNA (cDNA clone MGC:6995 IMAGE:3155102), complete cds P

EST sequences (10 of 383) [Show all sequences]

CA565461.1 Clone NIA:K0338D09_IMAGE:30057932 bone 5' read P
CA749195.1 Clone IMAGE:6828027 brain 5' read P
CA749803.1 Clone IMAGE:6828416 brain 5' read P
CA750839.1 Clone IMAGE:6829722 brain 5' read P
CA751191.1 Clone IMAGE:6829508 brain 5' read P
CA751548.1 Clone IMAGE:6830016 brain 5' read P
CA751844.1 Clone IMAGE:6830185 brain 5' read P
CA752119.1 Clone IMAGE:6832187 brain 5' read P
BY080618.1 Clone K630026E19 brain 5' read P
BY096503.1 Clone K630111P10 embryonic tissue 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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