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UGID:1108128     UniGene Mm.309092     Mus musculus (mouse)   Gapdh
Glyceraldehyde-3-phosphate dehydrogenase (Gapdh)

Mouse protein-coding gene Gapdh. Represented by 466 ESTs from 140 cDNA libraries. [UniGene 1108128 - Mm.309092]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001476757.1 PREDICTED: glyceraldehyde-3-phosphate dehydrogenase-like isoform 2 M. musculus 100.0 332
NP_002037.2 GAPDH gene product H. sapiens 94.9 332
NP_001108586.1 gapdh gene product D. rerio 88.3 332
NP_001080567.1 glyceraldehyde-3-phosphate dehydrogenase X. laevis 87.1 332
NP_508534.3 Protein GPD-3 C. elegans 81.0 335
NP_525108.2 glyceraldehyde 3 phosphate dehydrogenase 1, isoform A D. melanogaster 79.8 331
XP_956977.1 glyceraldehyde 3-phosphate dehydrogenase N. crassa 76.6 336
NP_011708.3 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) TDH3 S. cerevisiae 70.3 330
NP_172801.1 glyceraldehyde 3-phosphate dehydrogenase A. thaliana 70.1 334
XP_001703199.1 glyceraldehyde 3-phosphate dehydrogenase, dominant splicing variant C. reinhardtii 65.8 351
Other hits (2 of 66) [Show all]SpeciesId(%)Len(aa)
XP_001062726.1 PREDICTED: glyceraldehyde-3-phosphate dehydrogenase-like R. norvegicus 99.1 332
NP_001003142.1 GAPDH gene product C. lupus familiaris 96.1 332

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; brain; skin; mammary gland; joint; thymus; mixed; pancreas; kidney; extraembryonic tissue; muscle; spleen; lung; bone marrow; blood; heart; stomach; eye; uncharacterized tissue; intestine; tongue; ovary; liver; testis; spinal cord; pituitary gland; dorsal root ganglion; bone; inner ear; salivary gland; connective tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 6 F2|6 59.32 cM
UniSTS entry: Chr 9 PMC316856P1
UniSTS entry: Chr 9 Gapd
UniSTS entry: Chr 9 PMC193571P1
UniSTS entry: Chr 9 Gapdh
UniSTS entry: Chr 9 PMC26839P1
UniSTS entry: Chr Y PMC114224P2
UniSTS entry: Chr 9 PMC112637P1
UniSTS entry: Chr 9 PMC133555P1
UniSTS entry: Chr 9 GDB:376732
UniSTS entry: Chr 9 PMC109593P1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (20)

BC085275.1 Mus musculus glyceraldehyde-3-phosphate dehydrogenase, mRNA (cDNA clone MGC:103193 IMAGE:30444086), complete cds PA
AK204918.1 Mus musculus cDNA, clone:Y1G0150A18, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000032484, based on BLAT search
AK204659.1 Mus musculus cDNA, clone:Y1G0149D12, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000032484, based on BLAT search A
AK204481.1 Mus musculus cDNA, clone:Y1G0148J07, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000032484, based on BLAT search
AK204385.1 Mus musculus cDNA, clone:Y1G0148D22, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000032484, based on BLAT search
AK204063.1 Mus musculus cDNA, clone:Y1G0147D06, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000070413, based on BLAT search
AK203802.1 Mus musculus cDNA, clone:Y1G0146E02, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000032484, based on BLAT search
AK203511.1 Mus musculus cDNA, clone:Y1G0145C11, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000032484, based on BLAT search
AK203145.1 Mus musculus cDNA, clone:Y1G0143O20, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000032484, based on BLAT search
AK203035.1 Mus musculus cDNA, clone:Y1G0143I17, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000032484, based on BLAT search
AK201876.1 Mus musculus cDNA, clone:Y1G0139K09, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000032484, based on BLAT search
AK199560.1 Mus musculus cDNA, clone:Y1G0131K01, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000032484, based on BLAT search
AK199531.1 Mus musculus cDNA, clone:Y1G0131I07, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000032484, based on BLAT search
AK194309.1 Mus musculus cDNA, clone:Y1G0114O15, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000032484, based on BLAT search
AK192522.1 Mus musculus cDNA, clone:Y1G0109C15, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000032484, based on BLAT search
AK192123.1 Mus musculus cDNA, clone:Y1G0107O18, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000032484, based on BLAT search A
AK191632.1 Mus musculus cDNA, clone:Y1G0106H18, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000032484, based on BLAT search
AK190063.1 Mus musculus cDNA, clone:Y1G0101K01, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000032484, based on BLAT search
AK184442.1 Mus musculus cDNA, clone:Y0G0130A11, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000051144, based on BLAT search P
AK160495.1 Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2300001M16 product:glyceraldehyde-3-phosphate dehydrogenase, full insert sequence P

EST sequences (10 of 466) [Show all sequences]

BY000310.1 Clone 1020002M21 heart 5' read P
BY001146.1 Clone 1500000O13 brain 5' read P
BY059167.1 Clone I730099E11 thymus 5' read
BY063031.1 Clone I920025H21 stomach 5' read P
BY064521.1 Clone I920034N06 liver 5' read P
BY071767.1 Clone I920079D19 mixed 5' read P
BY081125.1 Clone K630030H01 embryonic tissue 5' read P
BY092818.1 Clone K630093G03 mixed 5' read P
BY093675.1 Clone K630097C06 mixed 5' read P
BY305775.1 Clone K920006C19 embryonic tissue 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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