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UGID:276843     UniGene Mm.87628     Mus musculus (mouse)   Cactin
Cactin, spliceosome C complex subunit (Cactin)

Mouse protein-coding gene Cactin. Represented by 144 ESTs from 72 cDNA libraries. Corresponds to reference sequence NM_027381.2. [UniGene 276843 - Mm.87628]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_081657.1 cactin M. musculus 100.0 771
NP_001074012.1 CACTIN gene product H. sapiens 94.7 757
NP_001104563.1 WITHDRAWN: zgc:158620 gene product D. rerio 70.2 242
XP_001695186.1 predicted protein C. reinhardtii 68.0 146
NP_523422.3 cactin D. melanogaster 59.4 725
NP_001254422.1 Protein CACN-1, isoform a C. elegans 49.0 644
NP_171887.1 uncharacterized protein A. thaliana 48.7 669
XP_964841.2 hypothetical protein NCU08633 N. crassa 46.7 444
Other hits (2 of 44) [Show all]SpeciesId(%)Len(aa)
NP_001074916.1 Cactin gene product R. norvegicus 98.6 762
XP_542173.3 PREDICTED: uncharacterized protein C19orf29 C. lupus familiaris 94.5 751

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; brain; ovary; tongue; bone marrow; lymph node; mammary gland; eye; extraembryonic tissue; fertilized ovum; thymus; liver; testis; lung; kidney; skin; uncharacterized tissue; bone; connective tissue; mixed; intestine; spleen; pancreas; stomach; inner ear; sympathetic ganglion
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10 C1|10
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AY934504.1 Mus musculus cactin mRNA, complete cds P
NM_027381.2 Mus musculus cactin, spliceosome C complex subunit (Cactin), mRNA P
BC151180.1 Mus musculus RIKEN cDNA 2510012J08 gene, mRNA (cDNA clone MGC:184080 IMAGE:9088069), complete cds P
BC150986.1 Mus musculus RIKEN cDNA 2510012J08 gene, mRNA (cDNA clone MGC:183899 IMAGE:9087899), complete cds P
AK010963.1 Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510012J08 product:SIMILAR TO CACTIN (FRAGMENT) homolog [Homo sapiens], full insert sequence P
BC023696.1 Mus musculus RIKEN cDNA 2510012J08 gene, mRNA (cDNA clone IMAGE:5344831), partial cds PA

EST sequences (10 of 144) [Show all sequences]

CA752130.1 Clone IMAGE:6832237 brain 5' read P
BY014557.1 Clone G730047A15 lung 5' read P
BY210226.1 Clone F730314I10 skin 5' read
BY253797.1 Clone K330008H21 brain 5' read P
BY259704.1 Clone K330047D18 brain 5' read
BY264731.1 Clone K330329I07 brain 5' read
BY267777.1 Clone K430019E10 brain 5' read P
BY271445.1 Clone K430045J10 brain 5' read P
BY279225.1 Clone K430339F13 brain 5' read P
BY282976.1 Clone K530006N10 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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