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UGID:276838     UniGene Mm.87611     Mus musculus (mouse)   Cul1
Cullin 1 (Cul1)

Mouse protein-coding gene Cul1. Represented by 797 ESTs from 212 cDNA libraries. Corresponds to reference sequence NM_012042.3. [UniGene 276838 - Mm.87611]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_036172.1 Cul1 gene product M. musculus 100.0 775
NP_001102097.1 Cul1 gene product R. norvegicus 100.0 775
XP_002198372.1 PREDICTED: cullin-1 T. guttata 100.0 775
XP_418878.3 PREDICTED: cullin-1 G. gallus 100.0 775
XP_003204724.1 PREDICTED: cullin-1-like M. gallopavo 100.0 775
XP_003896856.1 PREDICTED: cullin-1 isoform 1 P. anubis 100.0 775
NP_001233533.1 CUL1 gene product P. troglodytes 100.0 775
NP_003583.2 CUL1 gene product H. sapiens 100.0 775
XP_848402.1 PREDICTED: cullin-1 isoform 3 C. lupus familiaris 100.0 775
XP_001504677.2 PREDICTED: cullin-1-like isoform 1 E. caballus 100.0 775
NP_001180162.1 cullin-1 B. taurus 100.0 775
XP_002711990.1 PREDICTED: cullin 1 O. cuniculus 100.0 775
XP_002803558.1 PREDICTED: cullin-1-like M. mulatta 100.0 737
XP_003222338.1 PREDICTED: cullin-1-like A. carolinensis 100.0 666
XP_001363164.1 PREDICTED: cullin-1-like M. domestica 99.9 775
NP_001089364.1 cullin 1 X. laevis 99.9 775
NP_001039255.1 cul1 gene product X. tropicalis 99.9 775
XP_003130332.3 PREDICTED: LOW QUALITY PROTEIN: cullin-1-like S. scrofa 99.9 775
XP_004008392.1 PREDICTED: cullin-1 O. aries 99.9 758
NP_955953.2 cul1a gene product D. rerio 98.6 776
NP_523655.1 lin-19-like, isoform D D. melanogaster 73.7 772
XP_962203.2 hypothetical protein NCU05204 N. crassa 59.1 723
NP_499309.1 Protein CUL-1 C. elegans 56.0 764
Other hits (2 of 28) [Show all]SpeciesId(%)Len(aa)
XP_003459518.1 PREDICTED: cullin-1-like O. niloticus 98.3 775
XP_003977207.1 PREDICTED: LOW QUALITY PROTEIN: cullin-1-like T. rubripes 97.9 775

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; ovary; fertilized ovum; brain; mixed; mammary gland; eye; bone marrow; lung; testis; pancreas; extraembryonic tissue; thymus; blood; molar; skin; kidney; liver; intestine; uncharacterized tissue; inner ear; tongue; pituitary gland; stomach; prostate; thyroid; muscle; spinal cord; dorsal root ganglion; connective tissue; bone; spleen; heart; nasopharynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6|6 B3
UniSTS entry: RH44316
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (17)

AK040053.1 Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430053B07 product:cullin 1, full insert sequence
AK080300.1 Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630042M01 product:unclassifiable, full insert sequence
BC004836.1 Mus musculus cullin 1, mRNA (cDNA clone IMAGE:2651235), partial cds PA
AK213513.1 Mus musculus cDNA, clone:Y2G0128I24, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000031697, based on BLAT search
AK209075.1 Mus musculus cDNA, clone:Y2G0113N14, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000031697, based on BLAT search P
AK208612.1 Mus musculus cDNA, clone:Y2G0112D03, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000031697, based on BLAT search P
AK201269.1 Mus musculus cDNA, clone:Y1G0137K24, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000031697, based on BLAT search P
AK200736.1 Mus musculus cDNA, clone:Y1G0135L18, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000031697, based on BLAT search
AK199421.1 Mus musculus cDNA, clone:Y1G0131C13, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000031697, based on BLAT search
AK164274.1 Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030060P08 product:cullin 1, full insert sequence P
AK147004.1 Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920086F14 product:cullin 1, full insert sequence P
AK165978.1 Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730025H07 product:cullin 1, full insert sequence P
AF083216.1 Mus musculus SCF complex protein cul-1 mRNA, complete cds P
NM_012042.3 Mus musculus cullin 1 (Cul1), mRNA PA
AF176910.1 Mus musculus cullin 1 (Cul1) mRNA, complete cds PA
AF136441.1 Mus musculus cullin 1 (Cul1) mRNA, complete cds PA
BC029260.1 Mus musculus cullin 1, mRNA (cDNA clone MGC:35976 IMAGE:2812400), complete cds PA

EST sequences (10 of 797) [Show all sequences]

CA567511.1 Clone NIA:K0415C09_IMAGE:30060512 bone marrow 5' read P
CA569518.1 Clone NIA:K0444B09_IMAGE:30063284 bone marrow 5' read P
CA578869.1 Clone NIA:K0729E10_IMAGE:30076377 bone marrow 5' read P
BY002826.1 Clone 6620412F09 ovary 5' read
BY014881.1 Clone G730048H14 lung 5' read
BY021144.1 Clone G830046B12 mammary gland 5' read
BY030516.1 Clone I0C0012G23 fertilized ovum 5' read
BY036207.1 Clone I530023C23 mixed 5' read
BY067326.1 Clone I920053K24 kidney 5' read
BY068467.1 Clone I920060F05 extraembryonic tissue 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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