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UGID:275253     UniGene Mm.76757     Mus musculus (mouse)   Fam47e
Family with sequence similarity 47, member E (Fam47e)

Mouse protein-coding gene Fam47e. Represented by 22 ESTs from 11 cDNA libraries. EST representation biased toward oviduct; oocyte. Corresponds to 2 reference sequences (different isoforms). [UniGene 275253 - Mm.76757]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001028650.2 uncharacterized protein LOC384198 isoform 1 M. musculus 100.0 259
NP_001130042.1 protein FAM47E isoform a H. sapiens 56.7 386
Other hits (2 of 8) [Show all]SpeciesId(%)Len(aa)
XP_003751389.1 PREDICTED: LOW QUALITY PROTEIN: protein FAM47E-like R. norvegicus 77.8 400
XP_003898780.1 PREDICTED: protein FAM47E isoform 2 P. anubis 57.5 397

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: oviduct [show more like this]
oocyte [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: liver; mixed; brain; embryonic tissue; oviduct; ovary; bone marrow; lung
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5 E2|5
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AK050399.1 Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730043O17 product:unclassifiable, full insert sequence PA
AK144479.1 Mus musculus adult male gall bladder cDNA, RIKEN full-length enriched library, clone:G630076F23 product:hypothetical protein, full insert sequence P
NM_001033478.2 Mus musculus family with sequence similarity 47, member E (Fam47e), transcript variant 1, mRNA PA
BC147167.1 Mus musculus gene model 1381, (NCBI), mRNA (cDNA clone MGC:182312 IMAGE:9056206), complete cds P
BC147168.1 Mus musculus gene model 1381, (NCBI), mRNA (cDNA clone MGC:182313 IMAGE:9056207), complete cds P
NM_001170571.1 Mus musculus family with sequence similarity 47, member E (Fam47e), transcript variant 2, mRNA PA

EST sequences (10 of 22) [Show all sequences]

BY733750.1 Clone G630076F23 liver 5' read P
BY742585.1 Clone C730013C05 liver 5' read P
BY742690.1 Clone C730043O17 liver 5' read
BY761152.1 Clone C730043O17 liver 3' read A
DT919442.1 bone marrow P
DV648863.1 Clone DS045A_B04 ovary 5' read P
AA244788.1 Clone IMAGE:679511 liver 5' read P
AA255177.1 Clone IMAGE:720217 liver 5' read P
AA277114.1 Clone IMAGE:737873 liver 5' read P
AW123841.1 Clone UI-M-BH2.1-app-a-06-0-UI mixed 3' read A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

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