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UGID:273439     UniGene Mm.60929     Mus musculus (mouse)   Actrt1
Actin-related protein T1 (Actrt1)

Mouse protein-coding gene Actrt1. Represented by 6 ESTs from 5 cDNA libraries. Corresponds to reference sequence NM_028514.3. [UniGene 273439 - Mm.60929]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_082790.1 actin-related protein T1 M. musculus 100.0 375
NP_612146.1 actin-related protein T1 H. sapiens 71.3 375
XP_001699068.1 actin C. reinhardtii 49.0 368
NP_523800.1 actin 57B, isoform A D. melanogaster 49.0 368
NP_853632.2 actb2 gene product D. rerio 49.0 368
NP_505818.1 Protein ACT-2 C. elegans 48.9 371
NP_001082422.1 actin, cytoplasmic 1 X. laevis 48.7 371
XP_961133.2 actin N. crassa 47.4 368
NP_566988.1 actin 3 A. thaliana 47.3 371
NP_116614.1 actin S. cerevisiae 47.1 368
Other hits (2 of 65) [Show all]SpeciesId(%)Len(aa)
NP_001013983.1 actin-related protein T1 R. norvegicus 94.2 375
XP_002720325.1 PREDICTED: actin-related protein T1 O. cuniculus 72.7 373

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; uncharacterized tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: X|X A3.1
UniSTS entry: Chr X BE456663
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

BC116432.1 Mus musculus actin-related protein T1, mRNA (cDNA clone MGC:144638 IMAGE:40104435), complete cds P
BC116431.1 Mus musculus actin-related protein T1, mRNA (cDNA clone MGC:144637 IMAGE:40104427), complete cds P
AK006855.1 Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700061J02 product:hypothetical Actin and actin-like containing protein, full insert sequence P
NM_028514.3 Mus musculus actin-related protein T1 (Actrt1), mRNA PA

EST sequences (6)

BX639619.1 Clone LIONp462H06368 uncharacterized tissue 3' read A
AV205026.1 Clone 1700061J02 testis 3' read PA
AV266809.1 Clone 4930520L03 testis 3' read A
AV279304.1 Clone 4933406M22 testis 3' read A
BE456663.1 Clone IMAGE:2797367 testis 3' read PA
BF149651.1 Clone IMAGE:3664632 testis 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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