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UGID:255933     UniGene Mm.502     Mus musculus (mouse)   Ifnar1
Interferon (alpha and beta) receptor 1 (Ifnar1)

Mouse protein-coding gene Ifnar1. Represented by 224 ESTs from 102 cDNA libraries. Corresponds to reference sequence NM_010508.2. [UniGene 255933 - Mm.502]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_034638.2 Ifnar1 gene product M. musculus 100.0 589
NP_000620.2 IFNAR1 gene product H. sapiens 55.2 549
Other hits (2 of 11) [Show all]SpeciesId(%)Len(aa)
NP_001099363.2 interferon alpha/beta receptor 1 isoform 1 precursor R. norvegicus 74.3 591
XP_001494689.3 PREDICTED: interferon alpha/beta receptor 1-like E. caballus 54.9 559

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; embryonic tissue; mammary gland; uncharacterized tissue; bone marrow; muscle; spinal cord; liver; stomach; pancreas; prostate; skin; eye; lung; kidney; connective tissue; thymus; spleen; bone; extraembryonic tissue; heart; testis; pituitary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16 C3.3|16 52.98 cM
UniSTS entry: Ifnar1
UniSTS entry: Chr 9 D9Mit34.1 [Map Viewer]
UniSTS entry: Chr 9 px-24g4
UniSTS entry: Chr 9 px-65a8
UniSTS entry: Chr 9 px-72g5
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

BC043935.1 Mus musculus interferon (alpha and beta) receptor 1, mRNA (cDNA clone MGC:49745 IMAGE:4507009), complete cds PA
BC052217.1 Mus musculus interferon (alpha and beta) receptor 1, mRNA (cDNA clone MGC:60599 IMAGE:30008497), complete cds PA
BC052429.1 Mus musculus interferon (alpha and beta) receptor 1, mRNA (cDNA clone MGC:63396 IMAGE:6836300), complete cds PA
AK217677.1 Mus musculus cDNA, clone:Y2G0142J10, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000023689, based on BLAT search
AK199548.1 Mus musculus cDNA, clone:Y1G0131J09, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000023689, based on BLAT search
AK187039.1 Mus musculus cDNA, clone:Y0G0139J22, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000023689, based on BLAT search
AK178895.1 Mus musculus cDNA, clone:Y0G0108E22, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000023689, based on BLAT search P
AK165269.1 Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430006L17 product:hypothetical protein, full insert sequence
AK132431.1 Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4632424N10 product:interferon (alpha and beta) receptor 1, full insert sequence P
AK136950.1 Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430004P09 product:interferon (alpha and beta) receptor 1, full insert sequence P
AK148246.1 Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370064B02 product:interferon (alpha and beta) receptor 1, full insert sequence P
AK141630.1 Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630047H14 product:interferon (alpha and beta) receptor 1, full insert sequence P
AK157555.1 Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830223B22 product:interferon (alpha and beta) receptor 1, full insert sequence P
M89641.1 Mus musculus interferon alpha/beta receptor (IFNAR) mRNA, complete cds P
NM_010508.2 Mus musculus interferon (alpha and beta) receptor 1 (Ifnar1), mRNA PA

EST sequences (10 of 224) [Show all sequences]

CA564320.1 Clone NIA:K0324G09_IMAGE:30056624 bone 5' read
BY013546.1 Clone G730040B03 lung 5' read P
BY023868.1 Clone G930019E06 mammary gland 5' read P
BY024515.1 Clone G930023H15 mammary gland 5' read P
BY025552.1 Clone G930031E13 mammary gland 5' read P
BY025894.1 Clone G930033N05 mammary gland 5' read P
BY028236.1 Clone G930047M14 mammary gland 5' read P
BY028294.1 Clone G930048A14 mammary gland 5' read P
BY094713.1 Clone K630102B16 heart 5' read P
BY104854.1 Clone K630156P21 thymus 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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