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UGID:3043488     UniGene Mm.462308     Mus musculus (mouse)   Atp6v0a4
ATPase, H+ transporting, lysosomal V0 subunit A4 (Atp6v0a4)

Mouse protein-coding gene Atp6v0a4. Represented by 42 ESTs from 20 cDNA libraries. Corresponds to reference sequence NM_080467.3. [UniGene 3043488 - Mm.462308]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_536715.3 Atp6v0a4 gene product M. musculus 100.0 832
NP_065683.2 ATP6V0A4 gene product H. sapiens 88.3 839
NP_001083384.1 ATPase, H+ transporting, lysosomal V0 subunit a4 X. laevis 75.5 845
NP_001018502.1 atp6v0a1b gene product D. rerio 62.7 838
NP_733271.1 vacuolar H[+] ATPase subunit 100-1, isoform A D. melanogaster 59.4 828
NP_001023022.1 Protein UNC-32, isoform f C. elegans 56.8 872
NP_179736.1 V-type H+-transporting ATPase subunit I A. thaliana 46.5 804
Other hits (2 of 46) [Show all]SpeciesId(%)Len(aa)
NP_001100061.1 V-type proton ATPase 116 kDa subunit a isoform 4 R. norvegicus 95.9 800
XP_001105743.2 PREDICTED: v-type proton ATPase 116 kDa subunit a isoform 4-like isoform 1 M. mulatta 89.3 837

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: kidney; embryonic tissue; mammary gland; lung; mixed; fertilized ovum; eye; extraembryonic tissue; spleen; nasopharynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6 B1|6
UniSTS entry: Atp6v0a4
UniSTS entry: Atp6v0a4
UniSTS entry: Atp6v0a4
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AK086811.1 Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030002H06 product:unclassifiable, full insert sequence
BC046979.1 Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A4, mRNA (cDNA clone MGC:54824 IMAGE:6315485), complete cds PA
AK128892.1 Mus musculus cDNA fis, clone TRACH2004887, moderately similar to Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a isoform 4 (ATP6V0A4) P
AK165464.1 Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:F530009L08 product:ATPase, H+ transporting, lysosomal V0 subunit A isoform 4, full insert sequence P
AK143790.1 Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430109B04 product:ATPase, H+ transporting, lysosomal V0 subunit A isoform 4, full insert sequence P
AB050903.1 Mus musculus mRNA for a4 subunit isoform, complete cds P
AF326316.1 Mus musculus H-ATPase accessory subunit a4 mRNA, complete cds P
NM_080467.3 Mus musculus ATPase, H+ transporting, lysosomal V0 subunit A4 (Atp6v0a4), mRNA PA
AF435090.1 Mus musculus vacuolar proton translocating ATPase a4 isoform mRNA, complete cds PA

EST sequences (10 of 42) [Show all sequences]

BY006610.1 Clone F530009L08 kidney 5' read
BY094200.1 Clone K630099G18 extraembryonic tissue 5' read
CD241395.1 Clone IMAGE:30379833 kidney 5' read P
BX511979.1 Clone IMAGp952N1148_;_IMAGE:991284 embryonic tissue 5' read A
BX529190.1 Clone IMAGp998K205701_;_IMAGE:2301067 kidney P
CK617747.1 Clone ml01b06 eye 5' read P
CN707213.1 Clone NIA:E0528F01_IMAGE:30880860 embryonic tissue 5' read P
CJ169470.1 Clone M130027A17 embryonic tissue 5' read P
CJ174377.1 Clone M130044P19 embryonic tissue 5' read P
AA574642.1 Clone IMAGE:991284 embryonic tissue 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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