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UGID:271534     UniGene Mm.46016     Mus musculus (mouse)   Pcolce2
Procollagen C-endopeptidase enhancer 2 (Pcolce2)

Mouse protein-coding gene Pcolce2. Represented by 73 ESTs from 43 cDNA libraries. Corresponds to reference sequence NM_029620.2. [UniGene 271534 - Mm.46016]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_083896.1 procollagen C-endopeptidase enhancer 2 precursor M. musculus 100.0 413
NP_037495.1 procollagen C-endopeptidase enhancer 2 precursor H. sapiens 90.4 414
NP_001080499.1 procollagen C-endopeptidase enhancer 2 precursor X. laevis 81.1 406
NP_956754.1 pcolce2b gene product D. rerio 75.9 405
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
NP_001121112.1 PCOLCE2 gene product R. norvegicus 97.6 413
XP_002803020.1 PREDICTED: procollagen C-endopeptidase enhancer 2-like M. mulatta 91.3 265

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; eye; mammary gland; prostate; thymus; muscle; pituitary gland; skin; testis; mixed; bone marrow; brain; tongue; connective tissue; lung; uncharacterized tissue; olfactory mucosa; spleen; salivary gland; intestine; extraembryonic tissue; inner ear; joint; nasopharynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9 E3.3|9
UniSTS entry: Chr 9 Pcolce2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

BC051174.1 Mus musculus procollagen C-endopeptidase enhancer 2, mRNA (cDNA clone MGC:56885 IMAGE:6310294), complete cds PA
AK132395.1 Mus musculus 1 day pregnant adult female mammary gland cDNA, RIKEN full-length enriched library, clone:4222403J03 product:procollagen C-endopeptidase enhancer 2, full insert sequence P
AK010249.1 Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2400001O18 product:procollagen C-endopeptidase enhancer 2, full insert sequence P
AF352788.1 Mus musculus procollagen COOH-terminal proteinase enhancer protein 2 (Pcolce2) mRNA, complete cds P
NM_029620.2 Mus musculus procollagen C-endopeptidase enhancer 2 (Pcolce2), mRNA P

EST sequences (10 of 73) [Show all sequences]

BY288678.1 Clone K530047L16 brain 5' read P
BY309953.1 Clone I320012F16 uncharacterized tissue 5' read P
BY330278.1 Clone L130014D09 connective tissue 5' read P
BY332156.1 Clone L130023M02 connective tissue 5' read P
BY334920.1 Clone L130041H11 connective tissue 5' read
BY342173.1 Clone L230038J08 joint 5' read P
BY356151.1 Clone 2310050P19 tongue 3' read P
BY356253.1 Clone 2310069K23 tongue 3' read P
BY371603.1 Clone G430088A04 brain 3' read P
BY586162.1 Clone I220002D23 olfactory mucosa 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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