NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:2830341     UniGene Mm.441696     Mus musculus (mouse)   Agrp
Agouti related protein (Agrp)

Mouse protein-coding gene Agrp. Represented by 11 ESTs from 6 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2830341 - Mm.441696]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001258735.1 agouti-related protein precursor M. musculus 100.0 130
NP_001129.1 AGRP gene product H. sapiens 84.1 131
Other hits (2 of 13) [Show all]SpeciesId(%)Len(aa)
NP_387499.1 Agrp gene product R. norvegicus 91.4 128
XP_001091740.1 PREDICTED: agouti-related protein M. mulatta 85.6 131

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; extraembryonic tissue; eye; uncharacterized tissue; thymus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 8
Map position: 8|8 D1-D2
UniSTS entry: Chr 8 RH94762
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

BC079902.1 Mus musculus agouti related protein, mRNA (cDNA clone MGC:100050 IMAGE:30611244), complete cds PA
AY497379.1 Mus musculus agouti-related protein (Agrp) mRNA, partial cds
NM_001271806.1 Mus musculus agouti related protein (Agrp), transcript variant 2, mRNA A
U89484.1 Mus musculus agouti-related protein (Agrp) mRNA, complete cds P
NM_007427.3 Mus musculus agouti related protein (Agrp), transcript variant 1, mRNA PA

EST sequences (11)

BX634450.1 Clone LIONp462E01433 uncharacterized tissue 3' read PA
CF738111.1 Clone IMAGE:30611244 eye 5' read P
CF900927.1 Clone NIA:A0321G03_IMAGE:30735242 extraembryonic tissue 5' read P
CF900283.1 Clone NIA:A0313F06_IMAGE:30734465 extraembryonic tissue 5' read P
CF900964.1 Clone NIA:A0322B09_IMAGE:30735284 extraembryonic tissue 5' read P
EL958127.1 eye 5' read
BB169204.1 Clone A230005D13 brain 3' read PA
BB174995.1 Clone A230054J22 brain 3' read PA
BB179926.1 Clone A230081G20 brain 3' read PA
BB206366.1 Clone A430075H22 thymus 3' read PA
BB588784.1 Clone A230005D13 brain 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help