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UGID:2828966     UniGene Mm.440321     Mus musculus (mouse)   Vamp5
Vesicle-associated membrane protein 5 (Vamp5)

Mouse protein-coding gene Vamp5. Represented by 31 ESTs from 24 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2828966 - Mm.440321]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001074211.1 vesicle-associated membrane protein 5 M. musculus 100.0 101
NP_006625.1 VAMP5 gene product H. sapiens 71.5 115
Other hits (2 of 11) [Show all]SpeciesId(%)Len(aa)
NP_446007.1 Vamp5 gene product R. norvegicus 90.2 101
XP_004007309.1 PREDICTED: vesicle-associated membrane protein 5 O. aries 84.5 97

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: muscle; pineal gland; tongue; spleen; inner ear; uncharacterized tissue; embryonic tissue; heart; testis; intestine; mixed; liver; brain; pancreas; kidney; mammary gland; extraembryonic tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6 C1|6
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BC086925.1 Mus musculus vesicle-associated membrane protein 5, mRNA (cDNA clone MGC:107648 IMAGE:6758831), complete cds PA
BC125559.1 Mus musculus cDNA clone IMAGE:40130074
BC125557.1 Mus musculus cDNA clone IMAGE:40130072
NM_001080742.2 Mus musculus vesicle-associated membrane protein 5 (Vamp5), transcript variant 2, mRNA P
BC145146.1 Mus musculus vesicle-associated membrane protein 5, mRNA (cDNA clone MGC:178705 IMAGE:9053697), complete cds
AF035643.1 Mus musculus VAMP5 mRNA, complete cds PA
AF119384.1 Mus musculus putative CAMP protein (Camp) mRNA, complete cds A
NM_016872.4 Mus musculus vesicle-associated membrane protein 5 (Vamp5), transcript variant 1, mRNA P
AK009266.1 Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310010E11 product:vesicle-associated membrane protein 5, full insert sequence P

EST sequences (10 of 31) [Show all sequences]

BY230999.1 Clone F930017H10 inner ear 5' read
BY236520.1 Clone F930048H13 inner ear 5' read
BY451768.1 Clone K630055N06 heart 3' read
BY709062.1 Clone 2310010E11 tongue 5' read P
CB946082.1 Clone IMAGE:30317663 testis 5' read P
CD740954.1 Clone UI-M-AO0-chy-b-07-0-UI pineal gland 3' read PA
BX519183.1 Clone IMAGp998M082742_;_IMAGE:1095343 muscle PA
BX631190.1 Clone LIONp462B05270 uncharacterized tissue 3' read
CJ225974.1 Clone I730035O22 spleen 3' read
AA030509.1 Clone IMAGE:464412 embryonic tissue 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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