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UGID:2684884     UniGene Mm.436988     Mus musculus (mouse)   Csmd1
CUB and Sushi multiple domains 1 (Csmd1)

Mouse protein-coding gene Csmd1. Represented by 21 ESTs from 12 cDNA libraries. Corresponds to reference sequence NM_053171.2. [UniGene 2684884 - Mm.436988]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_444401.2 Csmd1 gene product M. musculus 100.0 3563
NP_150094.5 CSMD1 gene product H. sapiens 94.0 3563
XP_693833.5 PREDICTED: CUB and sushi domain-containing protein 2 D. rerio 64.7 3544
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
NP_001032404.1 CUB and sushi domain-containing protein 1 precursor R. norvegicus 98.9 3563
XP_001916757.2 PREDICTED: CUB and sushi domain-containing protein 1 E. caballus 93.9 3535

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; spleen; fertilized ovum; mixed; connective tissue; joint
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 8
Map position: 8 A2|8
UniSTS entry: 39039612
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AK082377.1 Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230043C05 product:CUB and Sushi multiple domains 1, full insert sequence P
AK081081.1 Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930082H09 product:CUB and Sushi multiple domains 1, full insert sequence P
AK048713.1 Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230015P12 product:unclassifiable, full insert sequence P
AK220429.1 Mus musculus mRNA for mKIAA1890 protein P
AK134585.1 Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330436F07 product:CUB and Sushi multiple domains 1, full insert sequence P
AY017475.1 Mus musculus CSMD1 (Csmd1) mRNA, complete cds P
NM_053171.2 Mus musculus CUB and Sushi multiple domains 1 (Csmd1), mRNA P

EST sequences (10 of 21) [Show all sequences]

BY327982.1 Clone L130001A03 connective tissue 5' read
BY328303.1 Clone L130002O11 connective tissue 5' read
BY337495.1 Clone L230007O09 joint 5' read
CX218809.1 brain 5' read
CJ140439.1 Clone F830301J09 spleen 5' read
C85731.1 Clone J0213H02 fertilized ovum 3' read
BB350934.2 Clone B930082H09 brain 3' read P
BB381002.2 Clone C230009N10 brain 3' read
BB381812.2 Clone C230015P12 brain 3' read A
BB385992.2 Clone C230043C05 brain 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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