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UGID:269491     UniGene Mm.40068     Mus musculus (mouse)   Tubb3
Tubulin, beta 3 class III (Tubb3)

Mouse protein-coding gene Tubb3. Represented by 608 ESTs from 107 cDNA libraries. Corresponds to reference sequence NM_023279.2. [UniGene 269491 - Mm.40068]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_075768.1 Tubb3 gene product M. musculus 100.0 449
NP_640347.2 Tubb3 gene product R. norvegicus 100.0 449
XP_001377872.2 PREDICTED: tubulin beta-3 chain-like M. domestica 100.0 449
XP_003315296.1 PREDICTED: tubulin beta-3 chain isoform 1 P. troglodytes 100.0 449
NP_006077.2 TUBB3 gene product H. sapiens 100.0 449
XP_003355769.2 PREDICTED: tubulin beta-3 chain-like S. scrofa 100.0 449
NP_001070595.1 TUBB3 gene product B. taurus 100.0 449
NP_001088455.1 tubulin, beta 3 class III X. laevis 100.0 448
NP_989408.1 tubb3 gene product X. tropicalis 100.0 448
NP_001026769.1 tubulin beta-4 chain G. gallus 100.0 448
NP_942113.1 tubb5 gene product D. rerio 96.0 443
NP_523795.2 beta-Tubulin at 56D, isoform B D. melanogaster 94.8 443
NP_509585.1 Protein TBB-4 C. elegans 93.2 442
XP_001693997.1 beta tubulin 2 C. reinhardtii 88.9 442
XP_957669.2 tubulin beta chain N. crassa 88.4 440
NP_180515.1 tubulin beta A. thaliana 88.1 446
NP_116616.1 Tub2p S. cerevisiae 81.6 441
Other hits (2 of 62) [Show all]SpeciesId(%)Len(aa)
XP_002723537.1 PREDICTED: tubulin, beta, 4-like O. cuniculus 99.3 450
NP_001133764.1 Tubulin beta-3 chain S. salar 96.6 447

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; eye; spinal cord; dorsal root ganglion; sympathetic ganglion; fertilized ovum; mixed; ovary; olfactory mucosa; testis; pancreas; uncharacterized tissue; skin; intestine; stomach; inner ear; nasopharynx; bladder; turbinate; extraembryonic tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 8
Map position: 8 E1|8
UniSTS entry: Chr 8 Tubb3
UniSTS entry: Chr 6 Tubb3
UniSTS entry: Chr 18 RH65263
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AK051298.1 Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130031O03 product:tubulin, beta 3, full insert sequence P
AK082942.1 Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530009K02 product:tubulin, beta 3, full insert sequence P
AK198136.1 Mus musculus cDNA, clone:Y1G0127D18, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000047185, based on BLAT search
BC088749.1 Mus musculus tubulin, beta 3, mRNA (cDNA clone MGC:103107 IMAGE:6307387), complete cds PA
AK149014.1 Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120476D15 product:tubulin, beta 3, full insert sequence P
AF312873.1 Mus musculus tubulin beta-3 mRNA, complete cds P
AK014302.1 Mus musculus 14, 17 days embryo head cDNA, RIKEN full-length enriched library, clone:3200002H15 product:tubulin, beta 3, full insert sequence P
AK012528.1 Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700078D11 product:tubulin, beta 3, full insert sequence P
NM_023279.2 Mus musculus tubulin, beta 3 class III (Tubb3), mRNA PA
BC031357.1 Mus musculus tubulin, beta 3, mRNA (cDNA clone MGC:35812 IMAGE:5363050), complete cds PA

EST sequences (10 of 608) [Show all sequences]

BY003357.1 Clone E530112K18 brain 5' read
BY063005.1 Clone I920025G06 stomach 5' read P
BY093334.1 Clone K630095K15 mixed 5' read P
BY086423.1 Clone K630059N07 brain 5' read P
BY087682.1 Clone K630067E02 brain 5' read P
BY094502.1 Clone K630101A17 mixed 5' read P
BY100502.1 Clone K630132D23 brain 5' read P
BY106588.1 Clone L330005A03 embryonic tissue 5' read P
BY106617.1 Clone L330005D12 embryonic tissue 5' read P
BY106805.1 Clone L330006J11 embryonic tissue 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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