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UGID:269377     UniGene Mm.39825     Mus musculus (mouse)   Lmx1b
LIM homeobox transcription factor 1 beta (Lmx1b)

Mouse protein-coding gene Lmx1b. Represented by 2 ESTs from 1 cDNA libraries. Corresponds to reference sequence NM_010725.2. [UniGene 269377 - Mm.39825]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_002307.2 LMX1B gene product H. sapiens 100.0 394
NP_034855.2 Lmx1b gene product M. musculus 100.0 371
XP_001097412.1 PREDICTED: LIM homeobox transcription factor 1-beta isoform 2 M. mulatta 100.0 371
XP_001078699.2 PREDICTED: LIM homeobox transcription factor 1-beta isoform 2 R. norvegicus 99.8 394
NP_001083902.1 LIM homeobox transcription factor 1-beta.1 X. laevis 88.2 399
NP_001020338.2 lmx1bb gene product D. rerio 84.8 374
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_003582878.1 PREDICTED: LIM homeobox transcription factor 1-beta B. taurus 98.6 292
XP_003435360.1 PREDICTED: LIM homeobox transcription factor 1-beta C. lupus familiaris 98.6 355

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mammary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2 B|2 22.48 cM
UniSTS entry: Lmx1b
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

AB221651.1 Mus musculus cDNA pooled tissues:(tissue_type=brain,dev_stage=8-12 days neonate,strain=BALB/c),(tissue_type=testis,dev_stage=adult, strain=C57BL/6J), clone:V01Y040G13 P
BC119169.1 Mus musculus LIM homeobox transcription factor 1 beta, mRNA (cDNA clone MGC:155485 IMAGE:8733918), complete cds P
BC125469.1 Mus musculus LIM homeobox transcription factor 1 beta, mRNA (cDNA clone MGC:159172 IMAGE:40129984), complete cds P
AF078166.1 Mus musculus LIM homeodomain protein (Lmx1b) mRNA, complete cds P
NM_010725.2 Mus musculus LIM homeobox transcription factor 1 beta (Lmx1b), mRNA P

EST sequences (2)

BX520113.1 Clone IMAGp998B097650_;_IMAGE:3157928 mammary gland P
AW907857.1 Clone IMAGE:3157928 mammary gland 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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