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UGID:257374     UniGene Mm.3951     Mus musculus (mouse)   Thy1
Thymus cell antigen 1, theta (Thy1)

Mouse protein-coding gene Thy1. Represented by 174 ESTs from 65 cDNA libraries. Corresponds to reference sequence NM_009382.3. [UniGene 257374 - Mm.3951]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_033408.1 Thy1 gene product M. musculus 100.0 161
NP_006279.2 THY1 gene product H. sapiens 73.9 160
Other hits (2 of 15) [Show all]SpeciesId(%)Len(aa)
NP_036805.1 Thy1 gene product R. norvegicus 85.1 160
XP_002722764.1 PREDICTED: Thy-1 cell surface antigen O. cuniculus 77.0 160

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mammary gland; eye; embryonic tissue; thymus; uncharacterized tissue; prostate; spleen; mixed; connective tissue; sympathetic ganglion; inner ear; joint; uterus; skin; vagina; adipose tissue; lung; pancreas; nasopharynx; heart
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9 A5.1|9 24.52 cM
UniSTS entry: Chr 9 PMC151011P1
UniSTS entry: Chr 9 Thy1
UniSTS entry: Chr 9 Thy1
UniSTS entry: Chr 9 Thy1
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

AK080366.1 Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630073G07 product:unclassifiable, full insert sequence
AK003006.1 Mus musculus adult male brain cDNA, RIKEN full-length enriched library, clone:0710007A08 product:unclassifiable, full insert sequence
BC054436.1 Mus musculus thymus cell antigen 1, theta, mRNA (cDNA clone MGC:62652 IMAGE:6312210), complete cds PA
AY445633.1 Mus musculus CD90.1 mRNA, complete cds P
NM_009382.3 Mus musculus thymus cell antigen 1, theta (Thy1), mRNA PA

EST sequences (10 of 174) [Show all sequences]

BY001041.1 Clone 1422000C03 brain 5' read P
BY053591.1 Clone I730074D09 mixed 5' read P
BY291640.1 Clone K530310B11 brain 5' read
BY325442.1 Clone L030031B12 connective tissue 5' read
BY349313.1 Clone L830011L13 joint 5' read P
BY481247.1 Clone 7120467D10 sympathetic ganglion 3' read A
BY588828.1 Clone F930003M12 inner ear 3' read A
BY640885.1 Clone K430341C09 brain 3' read A
CB195612.1 Clone IMAGE:30137264 embryonic tissue 5' read P
CB524224.1 Clone IMAGE:6846545 brain 5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

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