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UGID:2000843     UniGene Mm.390229     Mus musculus (mouse)   Tmie
Transmembrane inner ear (Tmie)

Mouse protein-coding gene Tmie. Represented by 34 ESTs from 16 cDNA libraries. EST representation biased toward juvenile. Corresponds to reference sequence NM_146260.2. [UniGene 2000843 - Mm.390229]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_666372.1 transmembrane inner ear expressed protein precursor M. musculus 100.0 152
NP_001102769.1 transmembrane inner ear expressed protein R. norvegicus 100.0 152
NP_671729.2 transmembrane inner ear expressed protein precursor H. sapiens 95.4 150
NP_001164119.1 transmembrane inner ear expressed protein isoform b D. rerio 62.9 132
Other hits (2 of 17) [Show all]SpeciesId(%)Len(aa)
XP_001495843.2 PREDICTED: transmembrane inner ear expressed protein-like E. caballus 98.5 131
NP_001193663.1 transmembrane inner ear expressed protein precursor B. taurus 97.4 153

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: juvenile [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; mammary gland; kidney; thymus; intestine; adipose tissue; spinal cord; uncharacterized tissue; skin; extraembryonic tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9 F3|9 60.79 cM
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AK031966.1 Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330513L08 product:hypothetical protein, full insert sequence P
AK030341.1 Mus musculus 10 days neonate intestine cDNA, RIKEN full-length enriched library, clone:5131400L21 product:unclassifiable, full insert sequence P
BC141124.1 Mus musculus transmembrane inner ear, mRNA (cDNA clone MGC:176085 IMAGE:9055736), complete cds P
BC138840.1 Mus musculus transmembrane inner ear, mRNA (cDNA clone MGC:170467 IMAGE:8861862), complete cds P
AF481143.1 Mus musculus putative integral membrane protein TMIE (Tmie) mRNA, complete cds P
NM_146260.2 Mus musculus transmembrane inner ear (Tmie), mRNA P

EST sequences (10 of 34) [Show all sequences]

BY607067.1 Clone K230052J21 brain 3' read
BY718463.1 Clone 6330513L08 brain 5' read
BX523468.1 Clone IMAGp998B053620_;_IMAGE:1432228 kidney
CR516971.1 Clone LIONp462C10402 uncharacterized tissue 3' read
CR520428.1 Clone LIONp462F1098 uncharacterized tissue 3' read
AA204216.1 Clone IMAGE:640505 thymus 5' read
AA726531.1 Clone IMAGE:1209661 skin 5' read
AA987148.1 Clone IMAGE:1431993 kidney 3' read
AA986944.1 Clone IMAGE:1431945 kidney 5' read
AI050516.1 Clone IMAGE:1432228 kidney 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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