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UGID:257239     UniGene Mm.3552     Mus musculus (mouse)   Clock
Circadian locomotor output cycles kaput (Clock)

Mouse protein-coding gene Clock. Represented by 153 ESTs from 80 cDNA libraries. Corresponds to reference sequence NM_007715.5. [UniGene 257239 - Mm.3552]

SELECTED PROTEIN SIMILARITIES
GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; brain; lung; mammary gland; pancreas; pituitary gland; uncharacterized tissue; inner ear; mixed; eye; lymph node; ovary; prostate; skin; testis; spinal cord; extraembryonic tissue; bladder; vagina; spleen; thymus; molar; kidney; bone marrow; other; heart
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5 C3.3|5 40.63 cM
UniSTS entry: Chr 5 G54151
UniSTS entry: Chr 5 RH134641
UniSTS entry: Chr 5 AF000998
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

AK041303.1 Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530098D23 product:circadian locomoter output cycles kaput, full insert sequence P
AK040337.1 Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430087M24 product:circadian locomoter output cycles kaput, full insert sequence P
AK030352.1 Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330400M04 product:circadian locomoter output cycles kaput, full insert sequence P
AY118227.1 Mus musculus CLOCK mRNA, partial cds, alternatively spliced P
AK129118.1 Mus musculus mRNA for mKIAA0334 protein P
AB221635.1 Mus musculus cDNA pooled tissues:(tissue_type=brain,dev_stage=8-12 days neonate,strain=BALB/c),(tissue_type=testis,dev_stage=adult, strain=C57BL/6J), clone:V01Y035E09 P
AK132842.1 Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930435A08 product:circadian locomoter output cycles kaput, full insert sequence
AK144118.1 Mus musculus cDNA, RIKEN full-length enriched library, clone:G430025H21 product:circadian locomoter output cycles kaput, full insert sequence
AK140803.1 Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130028H05 product:circadian locomoter output cycles kaput, full insert sequence
AK158765.1 Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K230319I16 product:circadian locomoter output cycles kaput, full insert sequence P
BC129886.1 Mus musculus cDNA clone IMAGE:40111325, containing frame-shift errors P
AF000998.1 Mus musculus CLOCK (Clock) mRNA, complete cds P
NM_007715.5 Mus musculus circadian locomotor output cycles kaput (Clock), mRNA P

EST sequences (10 of 153) [Show all sequences]

CA569935.1 Clone NIA:K0449B06_IMAGE:30063761 bone marrow 5' read
BY021430.1 Clone G830047F11 mammary gland 5' read
BY231400.1 Clone F930019I06 inner ear 5' read
BY248768.1 Clone K230319I16 brain 5' read
BY252188.1 Clone K230343D04 brain 5' read
BY277264.1 Clone K430325I24 brain 5' read
BY370513.1 Clone G430025H21 mixed 3' read A
BY610807.1 Clone K230319I16 brain 3' read
BY614314.1 Clone K330002L02 brain 3' read
BY132412.1 Clone L930017C18 embryonic tissue 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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