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UGID:267189     UniGene Mm.34212     Mus musculus (mouse)   Leprotl1
Leptin receptor overlapping transcript-like 1 (Leprotl1)

Mouse protein-coding gene Leprotl1. Represented by 295 ESTs from 122 cDNA libraries. Corresponds to reference sequence NM_026609.2. [UniGene 267189 - Mm.34212]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_080885.1 leptin receptor overlapping transcript-like 1 M. musculus 100.0 130
NP_001013206.1 Leprotl1 gene product R. norvegicus 100.0 130
XP_532817.1 PREDICTED: leptin receptor overlapping transcript-like 1 C. lupus familiaris 100.0 130
NP_056159.2 leptin receptor overlapping transcript-like 1 isoform 1 H. sapiens 99.2 130
NP_001079518.1 leptin receptor overlapping transcript-like 1 X. laevis 91.6 130
NP_001002390.2 zgc:92045 gene product D. rerio 87.8 130
NP_495238.2 Protein C30B5.2, isoform a C. elegans 55.4 130
Other hits (2 of 36) [Show all]SpeciesId(%)Len(aa)
XP_002805353.1 PREDICTED: leptin receptor overlapping transcript-like 1-like isoform 2 M. mulatta 99.2 130
XP_528101.3 PREDICTED: leptin receptor overlapping transcript-like 1 isoform 2 P. troglodytes 99.2 130

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mammary gland; embryonic tissue; bone marrow; thymus; uncharacterized tissue; extraembryonic tissue; bone; spleen; pancreas; intestine; mixed; joint; lung; heart; uterus; testis; skin; stomach; connective tissue; eye; blood; liver; prostate; muscle; tongue; spinal cord; kidney; thyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 8
Map position: 8 A4|8
UniSTS entry: Chr 8 RH140663
UniSTS entry: Chr 8 AI854296
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

AK075740.1 Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1520402O14 product:BRAIN MY047 PROTEIN homolog [Homo sapiens], full insert sequence P
AK046807.1 Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830012G23 product:RIKEN cDNA 1520402O14 gene, full insert sequence
AK004393.1 Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110067H13 product:leptin receptor overlapping transcript-like 1, full insert sequence
AK203783.1 Mus musculus cDNA, clone:Y1G0146C23, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000033910, based on BLAT search P
AK203520.1 Mus musculus cDNA, clone:Y1G0145D02, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000033910, based on BLAT search P
AK200591.1 Mus musculus cDNA, clone:Y1G0135B17, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000033910, based on BLAT search
AK196729.1 Mus musculus cDNA, clone:Y1G0122L20, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000033910, based on BLAT search A
AK191563.1 Mus musculus cDNA, clone:Y1G0106E12, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000033910, based on BLAT search
AK150289.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830001J12 product:leptin receptor overlapping transcript-like 1, full insert sequence P
AK159401.1 Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420019G18 product:leptin receptor overlapping transcript-like 1, full insert sequence P
AK154712.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630104D24 product:leptin receptor overlapping transcript-like 1, full insert sequence P
AK153277.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830134G10 product:leptin receptor overlapping transcript-like 1, full insert sequence P
AK013870.1 Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3000004N01 product:BRAIN MY047 PROTEIN homolog [Homo sapiens], full insert sequence P
AK003329.1 Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110002O12 product:BRAIN MY047 PROTEIN homolog [Homo sapiens], full insert sequence P
NM_026609.2 Mus musculus leptin receptor overlapping transcript-like 1 (Leprotl1), mRNA PA
BC004677.1 Mus musculus leptin receptor overlapping transcript-like 1, mRNA (cDNA clone MGC:7819 IMAGE:3500223), complete cds PA

EST sequences (10 of 295) [Show all sequences]

BY000919.1 Clone 1210001A05 lung 5' read P
BY017083.1 Clone G830020F24 mammary gland 5' read P
BY025020.1 Clone G930028K15 mammary gland 5' read
BY027166.1 Clone G930042I06 mammary gland 5' read P
BY038588.1 Clone I730005M03 spleen 5' read P
BY044685.1 Clone I730033L11 thymus 5' read P
BY048576.1 Clone I730051C04 spleen 5' read P
BY060186.1 Clone I920006A13 stomach 5' read P
BY064337.1 Clone I920033N19 heart 5' read P
BY065689.1 Clone I920043M01 stomach 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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