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UGID:1131558     UniGene Mm.332522     Mus musculus (mouse)   Wdfy3
WD repeat and FYVE domain containing 3 (Wdfy3)

Mouse protein-coding gene Wdfy3. Represented by 239 ESTs from 119 cDNA libraries. Corresponds to reference sequence NM_172882.3. [UniGene 1131558 - Mm.332522]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_766470.2 Wdfy3 gene product M. musculus 100.0 3507
NP_055806.2 WD repeat and FYVE domain-containing protein 3 H. sapiens 97.0 3525
XP_001921741.3 PREDICTED: WD repeat and FYVE domain-containing protein 3 D. rerio 87.0 3501
NP_608968.2 blue cheese D. melanogaster 54.1 3438
NP_009961.2 Bph1p S. cerevisiae 53.2 481
XP_001696184.1 hypothetical protein CHLREDRAFT_167021 C. reinhardtii 49.6 236
XP_965811.2 hypothetical protein NCU00671 N. crassa 47.8 904
Other hits (2 of 45) [Show all]SpeciesId(%)Len(aa)
NP_001164022.1 WD repeat and FYVE domain-containing protein 3 R. norvegicus 98.5 3506
XP_002717099.1 PREDICTED: WD repeat and FYVE domain containing 3 isoform 2 O. cuniculus 97.2 3508

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; brain; eye; mixed; mammary gland; pancreas; kidney; bone marrow; testis; intestine; stomach; liver; tongue; prostate; uncharacterized tissue; ovary; muscle; thymus; skin; sympathetic ganglion; bladder; vagina; spinal cord; extraembryonic tissue; dorsal root ganglion; oviduct; salivary gland; lung; fertilized ovum; bone; inner ear; nasopharynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5 E4-E5|5 48.95 cM
UniSTS entry: Chr 5 AW319683
UniSTS entry: Ggtb3
UniSTS entry: Chr 9 D1S3690
UniSTS entry: Chr 5 RH126231
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

NM_172882.3 Mus musculus WD repeat and FYVE domain containing 3 (Wdfy3), mRNA PA
AK047077.1 Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930017C24 product:hypothetical ARM repeat structure containing protein, full insert sequence P
AK087235.1 Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030037M04 product:unclassifiable, full insert sequence P
AK050190.1 Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730025N11 product:unclassifiable, full insert sequence P
AB093277.1 Mus musculus mRNA for mKIAA0993 protein P
BC049866.1 Mus musculus WD repeat and FYVE domain containing 3, mRNA (cDNA clone IMAGE:5101135), with apparent retained intron A
BC058274.1 Mus musculus WD repeat and FYVE domain containing 3, mRNA (cDNA clone IMAGE:6515138), complete cds A
AY336569.1 Mus musculus BWF1 mRNA, complete cds P
AK164944.1 Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030040K19 product:WD repeat and FYVE domain containing 3, full insert sequence P
AK143189.1 Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130303P22 product:WD repeat and FYVE domain containing 3, full insert sequence
AK049447.1 Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430013M13 product:WD repeat and FYVE domain containing 3, full insert sequence P
AK161485.1 Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932438G11 product:WD repeat and FYVE domain containing 3, full insert sequence P
BC034123.1 Mus musculus WD repeat and FYVE domain containing 3, mRNA (cDNA clone IMAGE:4909968), **** WARNING: chimeric clone **** PA
D37791.1 Mus musculus mRNA for beta-1,4-galactosyltransferase, complete cds P
AK012075.1 Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610509D04 product:unclassifiable, full insert sequence
BC014824.1 Mus musculus WD repeat and FYVE domain containing 3, mRNA (cDNA clone IMAGE:4223483), with apparent retained intron A

EST sequences (10 of 239) [Show all sequences]

CA749365.1 Clone IMAGE:6831447 brain 5' read P
BY248136.1 Clone K230315G23 brain 5' read P
BY371765.1 Clone G430095I23 kidney 3' read A
BY711271.1 Clone 2610509D04 embryonic tissue 5' read
BY728964.1 Clone C430013M13 embryonic tissue 5' read P
BY731217.1 Clone E130011H12 eye 5' read
BY731464.1 Clone E130303P22 eye 5' read
CB247528.1 Clone IMAGE:6836695 brain 5' read P
CB520047.1 Clone IMAGE:6840901 brain 5' read P
CB524573.1 Clone IMAGE:6843855 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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