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UGID:1113414     UniGene Mm.314378     Mus musculus (mouse)   Arl5a
ADP-ribosylation factor-like 5A (Arl5a)

Mouse protein-coding gene Arl5a. Represented by 300 ESTs from 143 cDNA libraries. Corresponds to reference sequence NM_182994.2. [UniGene 1113414 - Mm.314378]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_892039.1 ADP-ribosylation factor-like protein 5A M. musculus 100.0 178
NP_446431.1 Arl5a gene product R. norvegicus 100.0 178
XP_001368928.1 PREDICTED: ADP-ribosylation factor-like protein 5A-like M. domestica 100.0 178
XP_003432531.1 PREDICTED: ADP-ribosylation factor-like 5A C. lupus familiaris 100.0 141
NP_036229.1 ADP-ribosylation factor-like protein 5A isoform 1 H. sapiens 99.4 178
NP_001084932.1 ADP-ribosylation factor-like 5C X. laevis 97.2 178
NP_001002339.1 arl5a gene product D. rerio 95.5 178
NP_648201.1 CG7197 D. melanogaster 77.4 177
NP_188935.1 ADP-ribosylation factor C1 A. thaliana 62.1 177
XP_001700009.1 small ARF-related GTPase C. reinhardtii 56.2 178
NP_010089.1 Arf1p S. cerevisiae 53.9 178
NP_498235.1 Protein ARF-1.2 C. elegans 53.3 180
XP_965243.1 ADP-ribosylation factor 1 N. crassa 53.3 167
Other hits (2 of 64) [Show all]SpeciesId(%)Len(aa)
XP_003907527.1 PREDICTED: ADP-ribosylation factor-like protein 5A P. anubis 99.4 178
XP_001136344.2 PREDICTED: ADP-ribosylation factor-like 5A P. troglodytes 99.4 178

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; brain; mammary gland; mixed; eye; blood; ovary; heart; thyroid; skin; molar; lymph node; muscle; inner ear; thymus; uncharacterized tissue; lung; pancreas; pituitary gland; testis; pineal gland; extraembryonic tissue; bladder; bone; vagina; dorsal root ganglion; spleen; intestine; kidney; sympathetic ganglion; nasopharynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2 C1.1|2
UniSTS entry: Chr 2 RH124752
UniSTS entry: Chr 2 RH125814
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AK013078.1 Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810410P22 product:unclassifiable, full insert sequence
BC048170.1 Mus musculus ADP-ribosylation factor-like 5A, mRNA (cDNA clone MGC:61369 IMAGE:6821976), complete cds PA
NM_182994.2 Mus musculus ADP-ribosylation factor-like 5A (Arl5a), mRNA P
BC059931.1 Mus musculus ADP-ribosylation factor-like 5A, mRNA (cDNA clone IMAGE:6821976) PA
AY974582.1 Mus musculus ADP-ribosylation factor 5-like (Arl) mRNA, partial sequence P
BC100307.1 Mus musculus ADP-ribosylation factor-like 5A, mRNA (cDNA clone MGC:117517 IMAGE:30843038), complete cds PA
AK147525.1 Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1061I19 product:ADP-ribosylation factor-like protein 5 homolog [Rattus norvegicus], full insert sequence P

EST sequences (10 of 300) [Show all sequences]

BY102768.1 Clone K630147K15 mixed 5' read
BY231035.1 Clone F930017K24 inner ear 5' read
BY236364.1 Clone F930047H20 inner ear 5' read P
BY260915.1 Clone K330304G17 brain 5' read
BY361137.1 Clone 6820443B07 embryonic tissue 3' read A
BY422631.1 Clone I920064L23 heart 3' read
BY478849.1 Clone G370098L20 skin 3' read A
BY603044.1 Clone K230022I01 brain 3' read
BY621038.1 Clone K330304G17 brain 3' read A
BY712126.1 Clone 2810410P22 embryonic tissue 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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