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UGID:265596     UniGene Mm.30837     Mus musculus (mouse)   Ndrg1
N-myc downstream regulated gene 1 (Ndrg1)

Mouse protein-coding gene Ndrg1. Represented by 985 ESTs from 169 cDNA libraries. Corresponds to reference sequence NM_008681.2. [UniGene 265596 - Mm.30837]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_032707.2 Ndrg1 gene product M. musculus 100.0 393
NP_001011991.1 Ndrg1 gene product R. norvegicus 99.8 393
NP_001128714.1 NDRG1 gene product H. sapiens 96.2 393
NP_001080627.1 protein NDRG1-B X. laevis 82.3 395
NP_998513.2 protein NDRG1 isoform 2 D. rerio 78.1 391
NP_523804.3 misexpression suppressor of KSR 2, isoform D D. melanogaster 46.2 318
Other hits (2 of 29) [Show all]SpeciesId(%)Len(aa)
XP_001498875.1 PREDICTED: protein NDRG1 E. caballus 96.5 402
XP_004011982.1 PREDICTED: protein NDRG1 O. aries 96.2 369

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: kidney; mammary gland; embryonic tissue; uncharacterized tissue; skin; brain; eye; lung; spinal cord; mixed; pancreas; blood; inner ear; extraembryonic tissue; liver; thymus; bladder; vagina; sympathetic ganglion; spleen; intestine; tongue; bone; bone marrow; muscle; stomach; uterus; heart; dorsal root ganglion; ovary; salivary gland; connective tissue; nasopharynx; thyroid; pituitary gland; joint
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 15
Map position: 15 D2|15
UniSTS entry: Chr 15 U60593
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (24)

AK045840.1 Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230314C07 product:unclassifiable, full insert sequence
BC071235.1 Mus musculus N-myc downstream regulated gene 1, mRNA (cDNA clone MGC:78211 IMAGE:4242075), complete cds PA
AK219688.1 Mus musculus cDNA, clone:Y2G0149E10, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000005256, based on BLAT search
AK207072.1 Mus musculus cDNA, clone:Y2G0106N07, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000005256, based on BLAT search A
AK200211.1 Mus musculus cDNA, clone:Y1G0133M19, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000005256, based on BLAT search
AK199494.1 Mus musculus cDNA, clone:Y1G0131G14, strand:unspecified P
AK194260.1 Mus musculus cDNA, clone:Y1G0114M08, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000005256, based on BLAT search
AK190968.1 Mus musculus cDNA, clone:Y1G0104G08, strand:unspecified P
AK188581.1 Mus musculus cDNA, clone:Y0G0145M03, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000005256, based on BLAT search
AK185443.1 Mus musculus cDNA, clone:Y0G0134B08, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000005256, based on BLAT search
AK165007.1 Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130118A20 product:N-myc downstream regulated 1, full insert sequence P
AK170809.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630201I06 product:N-myc downstream regulated 1, full insert sequence P
AK170636.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630111K18 product:N-myc downstream regulated 1, full insert sequence P
AK170439.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630103I03 product:N-myc downstream regulated 1, full insert sequence P
AK170281.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630041E17 product:N-myc downstream regulated 1, full insert sequence P
AK161860.1 Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330437B02 product:N-myc downstream regulated 1, full insert sequence P
BC171968.1 Mus musculus N-myc downstream regulated gene 1, mRNA (cDNA clone MGC:198673 IMAGE:9054254), complete cds P
BC141246.1 Mus musculus N-myc downstream regulated gene 1, mRNA (cDNA clone MGC:176207 IMAGE:9055858), complete cds P
U60593.1 Mus musculus cytoplasmic protein Ndr1 (Ndr1) mRNA, complete cds PA
U52073.1 Mus musculus TDD5 mRNA, complete cds P
NM_008681.2 Mus musculus N-myc downstream regulated gene 1 (Ndrg1), mRNA PA
AK004548.1 Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200002I14 product:N-myc downstream regulated 1, full insert sequence P
BC015282.1 Mus musculus N-myc downstream regulated gene 1, mRNA (cDNA clone MGC:18881 IMAGE:4237943), complete cds PA
AK098075.1 Mus musculus cDNA fis, clone TRACH2001968,highly similar to NDRG1 PROTEIN P

EST sequences (10 of 985) [Show all sequences]

CA563956.1 Clone NIA:K0320B01_IMAGE:30056172 bone 5' read P
CA564449.1 Clone NIA:K0326D01_IMAGE:30056772 bone 5' read P
CA565507.1 Clone NIA:K0338H08_IMAGE:30057979 bone 5' read P
CA566215.1 Clone NIA:K0347F08_IMAGE:30058819 bone 5' read P
CA567107.1 Clone NIA:K0409H05_IMAGE:30059992 bone marrow 5' read
CA568863.1 Clone NIA:K0434D10_IMAGE:30062349 bone marrow 5' read P
CA576285.1 Clone NIA:K0642E04_IMAGE:30072819 bone marrow 5' read P
BY006096.1 Clone F520003I19 kidney 5' read P
BY021002.1 Clone G830044H02 mammary gland 5' read P
BY039375.1 Clone I730010N16 spleen 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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