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UGID:1101323     UniGene Mm.302287     Mus musculus (mouse)   Lrrfip2
Leucine rich repeat (in FLII) interacting protein 2 (Lrrfip2)

Mouse protein-coding gene Lrrfip2. Represented by 168 ESTs from 85 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 1101323 - Mm.302287]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001158310.1 leucine-rich repeat flightless-interacting protein 2 isoform 1 M. musculus 100.0 414
NP_060194.1 LRRFIP2 gene product H. sapiens 98.0 399
NP_001085821.1 leucine-rich repeat flightless-interacting protein 2 X. laevis 85.9 404
NP_955773.1 lrrfip2 gene product D. rerio 84.9 404
NP_573082.1 CG8578 D. melanogaster 48.3 387
Other hits (2 of 32) [Show all]SpeciesId(%)Len(aa)
NP_001019932.1 Lrrfip2 gene product R. norvegicus 98.9 436
XP_001170841.1 PREDICTED: leucine-rich repeat flightless-interacting protein 2 isoform 9 P. troglodytes 98.2 399

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; brain; mammary gland; ovary; eye; lymph node; liver; bone marrow; thymus; uncharacterized tissue; spinal cord; skin; inner ear; mixed; blood; uterus; intestine; extraembryonic tissue; testis; spleen; heart; lung; connective tissue; bladder; muscle; joint
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9|9 F2
UniSTS entry: Chr 9 AI850587
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AK078881.1 Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030607E16 product:leucine rich repeat (in FLII) interacting protein 2, full insert sequence P
AK032167.1 Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430406O17 product:leucine rich repeat (in FLII) interacting protein 2, full insert sequence P
NM_027742.3 Mus musculus leucine rich repeat (in FLII) interacting protein 2 (Lrrfip2), transcript variant 2, mRNA P
NM_001164838.1 Mus musculus leucine rich repeat (in FLII) interacting protein 2 (Lrrfip2), transcript variant 1, mRNA P
AK017217.1 Mus musculus 10 days neonate intestine cDNA, RIKEN full-length enriched library, clone:5133400F20 product:leucine rich repeat (in FLII) interacting protein 2, full insert sequence P
BC014761.1 Mus musculus leucine rich repeat (in FLII) interacting protein 2, mRNA (cDNA clone MGC:25637 IMAGE:4217995), complete cds PA

EST sequences (10 of 168) [Show all sequences]

BY263543.1 Clone K330321K10 brain 5' read
BY322460.1 Clone L030014G24 connective tissue 5' read
BY346593.1 Clone L730026G08 joint 5' read
BY412528.1 Clone I730090N08 spleen 3' read P
BY449203.1 Clone K630037F01 heart 3' read P
BY450062.1 Clone K630043E06 heart 3' read
BY456361.1 Clone K630090C16 heart 3' read A
BY599061.1 Clone F930117M18 inner ear 3' read PA
BY726787.1 Clone B230029H12 brain 5' read
CA895356.1 Clone NIA:B0191E10_IMAGE:30102585 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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