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UGID:265220     UniGene Mm.30088     Mus musculus (mouse)   Clpx
Caseinolytic peptidase X (E.coli) (Clpx)

Mouse protein-coding gene Clpx. Represented by 180 ESTs from 104 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 265220 - Mm.30088]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_035932.2 ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform 1 M. musculus 100.0 633
NP_006651.2 CLPX gene product H. sapiens 99.2 632
NP_001090028.1 ClpX caseinolytic peptidase X homolog X. laevis 94.8 618
NP_001004581.1 clpx gene product D. rerio 91.0 608
NP_650843.1 CG4538, isoform A D. melanogaster 71.9 583
NP_001021077.1 Protein D2030.2, isoform b C. elegans 57.4 455
NP_568792.1 CLP protease regulatory subunit X A. thaliana 57.1 408
XP_001697962.1 ATP-dependent clp protease ATP-binding subunit C. reinhardtii 56.4 365
NP_009786.1 Mcx1p S. cerevisiae 48.6 451
XP_963250.2 hypothetical protein NCU05427 N. crassa 45.8 378
Other hits (2 of 52) [Show all]SpeciesId(%)Len(aa)
NP_001007804.1 Clpx gene product R. norvegicus 99.4 632
XP_852508.1 PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform 1 C. lupus familiaris 99.4 632

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; mammary gland; eye; brain; artery; mixed; thyroid; pituitary gland; connective tissue; prostate; bone marrow; uncharacterized tissue; ovary; testis; extraembryonic tissue; pancreas; molar; liver; muscle; uterus; kidney; bone; spleen; skin; intestine; thymus; heart; lymph node; lung; sympathetic ganglion
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9 C|9 35.22 cM
UniSTS entry: Chr 9 AU014732
UniSTS entry: MARC_21873-21874:1027099282:1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AK080339.1 Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630057G15 product:caseinolytic protease X (E.coli), full insert sequence P
AK041024.1 Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530063F16 product:caseinolytic protease X (E.coli), full insert sequence P
AK087848.1 Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330029I21 product:caseinolytic protease X (E.coli), full insert sequence P
BC061153.1 Mus musculus caseinolytic peptidase X (E.coli), mRNA (cDNA clone MGC:74287 IMAGE:6593118), complete cds PA
AK163034.1 Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430088F02 product:caseinolytic protease X (E.coli), full insert sequence P
AK165208.1 Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F420005I08 product:caseinolytic protease X (E.coli), full insert sequence P
NM_001044389.1 Mus musculus caseinolytic peptidase X (E.coli) (Clpx), transcript variant 2, mRNA P
NM_011802.2 Mus musculus caseinolytic peptidase X (E.coli) (Clpx), transcript variant 1, mRNA P
AF134983.1 Mus musculus energy-dependent regulator of proteolysis (ClpX) mRNA, complete cds PA
AJ276991.1 Mus musculus partial mRNA for ClpX protein P

EST sequences (10 of 180) [Show all sequences]

BY029006.1 Clone G930103F11 mammary gland 5' read
BY145790.1 Clone L930211E02 embryonic tissue 5' read P
BY289278.1 Clone K530051F21 brain 5' read P
BY319941.1 Clone I420103G20 bone 5' read P
BY363256.1 Clone B930014F03 brain 3' read A
BY365877.1 Clone E860115H21 embryonic tissue 3' read PA
BY377642.1 Clone G930103F11 mammary gland 3' read A
BY427530.1 Clone I920090H15 heart 3' read A
BY481514.1 Clone C730004G06 liver 3' read A
BY578086.1 Clone I6C0046M09 spleen 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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