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UGID:1077955     UniGene Mm.295456     Mus musculus (mouse)   Abcd2
ATP-binding cassette, sub-family D (ALD), member 2 (Abcd2)

Mouse protein-coding gene Abcd2. Represented by 93 ESTs from 48 cDNA libraries. Corresponds to reference sequence NM_011994.2. [UniGene 1077955 - Mm.295456]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_036124.2 ATP-binding cassette sub-family D member 2 M. musculus 100.0 740
NP_005155.1 ATP-binding cassette sub-family D member 2 H. sapiens 95.5 739
NP_001104656.1 abcd1 gene product D. rerio 71.0 614
NP_503105.1 Peroxisomal Membrane Protein related family member (pmp-4) C. elegans 62.1 715
NP_651906.1 CG2316, isoform A D. melanogaster 58.5 658
XP_957174.1 hypothetical protein NCU01751 N. crassa 49.3 625
NP_001084980.1 ATP-binding cassette, sub-family D (ALD), member 3 X. laevis 45.6 632
Other hits (2 of 45) [Show all]SpeciesId(%)Len(aa)
NP_203503.1 Abcd2 gene product R. norvegicus 98.1 740
XP_001168647.1 PREDICTED: ATP-binding cassette sub-family D member 2 isoform 1 P. troglodytes 95.7 739

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mammary gland; embryonic tissue; mixed; eye; kidney; lung; bladder; bone marrow; spinal cord; blood; dorsal root ganglion; oviduct; liver; muscle; pancreas; inner ear
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 15
Map position: 15 E-F|15
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AK082588.1 Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230066M19 product:ATP-binding cassette, sub-family D (ALD), member 2, full insert sequence P
AK051445.1 Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130049F16 product:ATP-binding cassette, sub-family D (ALD), member 2, full insert sequence P
AK087653.1 Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN full-length enriched library, clone:E230034P17 product:ATP-binding cassette, sub-family D (ALD), member 2, full insert sequence P
BC020388.1 Mus musculus ATP-binding cassette, sub-family D (ALD), member 2, mRNA (cDNA clone IMAGE:3583572) A
AK161931.1 Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430516O08 product:unclassifiable, full insert sequence
AK161027.1 Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:4432406H17 product:ATP-binding cassette, sub-family D (ALD), member 2, full insert sequence P
AK134763.1 Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330553D10 product:ATP-binding cassette, sub-family D (ALD), member 2, full insert sequence P
AK134560.1 Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330414O10 product:ATP-binding cassette, sub-family D (ALD), member 2, full insert sequence
Z48670.1 M.musculus mRNA for ALDR P
NM_011994.2 Mus musculus ATP-binding cassette, sub-family D (ALD), member 2 (Abcd2), mRNA P
BC019187.1 Mus musculus ATP-binding cassette, sub-family D (ALD), member 2, mRNA (cDNA clone MGC:29110 IMAGE:5027149), complete cds PA

EST sequences (10 of 93) [Show all sequences]

BY080628.1 Clone K630026F12 embryonic tissue 5' read P
BY080661.1 Clone K630026I01 mixed 5' read P
BY273045.1 Clone K430056J24 brain 5' read
BY301215.1 Clone K720013N15 embryonic tissue 5' read P
BY447980.1 Clone K630026F12 embryonic tissue 3' read A
BY718338.1 Clone 6330414O10 brain 5' read
BY718644.1 Clone 6330553D10 brain 5' read P
BY718883.1 Clone 6430516O08 brain 5' read
BY126891.1 Clone L630051J03 brain 5' read P
BY127186.1 Clone L630055H10 brain 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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