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UGID:1074555     UniGene Mm.292056     Mus musculus (mouse)   Acsl5
Acyl-CoA synthetase long-chain family member 5 (Acsl5)

Mouse protein-coding gene Acsl5. Represented by 519 ESTs from 167 cDNA libraries. Corresponds to reference sequence NM_027976.2. [UniGene 1074555 - Mm.292056]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_082252.1 long-chain-fatty-acid--CoA ligase 5 M. musculus 100.0 682
NP_057318.2 long-chain-fatty-acid--CoA ligase 5 isoform a H. sapiens 85.5 738
NP_001004599.1 acsl5 gene product D. rerio 74.3 680
NP_001080443.1 acyl-CoA synthetase long-chain family member 1 protein X. laevis 73.4 676
NP_490744.1 Protein ACS-13 C. elegans 58.1 647
NP_730369.1 CG3961, isoform A D. melanogaster 54.9 693
NP_198112.2 long-chain acyl-CoA synthetase 7 A. thaliana 53.3 606
XP_001702947.1 predicted protein C. reinhardtii 46.2 640
Other hits (2 of 54) [Show all]SpeciesId(%)Len(aa)
NP_446059.1 Acsl5 gene product R. norvegicus 97.5 682
XP_002718756.1 PREDICTED: acyl-CoA synthetase long-chain family member 5-like O. cuniculus 86.0 691

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: bone marrow; spleen; brain; mammary gland; mixed; thymus; embryonic tissue; liver; skin; uncharacterized tissue; kidney; lung; stomach; intestine; pancreas; blood; spinal cord; sympathetic ganglion; pituitary gland; bladder; muscle; bone; joint; extraembryonic tissue; eye; ovary; inner ear; connective tissue; testis; vagina; heart; oviduct; adipose tissue; salivary gland; dorsal root ganglion; tongue; artery
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19 D2|19
UniSTS entry: Acsl5
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (20)

AK034942.1 Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430064N06 product:fatty acid Coenzyme A ligase, long chain 5, full insert sequence P
AK219510.1 Mus musculus cDNA, clone:Y2G0148L05, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000043150, based on BLAT search P
AK218456.1 Mus musculus cDNA, clone:Y2G0145E04, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000043150, based on BLAT search P
AK214922.1 Mus musculus cDNA, clone:Y2G0133G16, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000043150, based on BLAT search
AK208291.1 Mus musculus cDNA, clone:Y2G0110L05, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000043150, based on BLAT search P
AK207048.1 Mus musculus cDNA, clone:Y2G0106M04, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000043150, based on BLAT search
AK206020.1 Mus musculus cDNA, clone:Y2G0103I04, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000043150, based on BLAT search P
AK197305.1 Mus musculus cDNA, clone:Y1G0124K22, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000043150, based on BLAT search P
AK182997.1 Mus musculus cDNA, clone:Y0G0124G09, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000043150, based on BLAT search
AK180613.1 Mus musculus cDNA, clone:Y0G0115C09, strand:unspecified
AK178323.1 Mus musculus cDNA, clone:Y0G0106E03, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000043150, based on BLAT search P
NM_027976.2 Mus musculus acyl-CoA synthetase long-chain family member 5 (Acsl5), mRNA PA
AK145894.1 Mus musculus 15 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530012C22 product:acyl-CoA synthetase long-chain family member 5, full insert sequence P
AK168019.1 Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730047J07 product:acyl-CoA synthetase long-chain family member 5, full insert sequence P
AK151378.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830028M17 product:acyl-CoA synthetase long-chain family member 5, full insert sequence P
AK150663.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830013G07 product:acyl-CoA synthetase long-chain family member 5, full insert sequence P
AK150542.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830011J17 product:acyl-CoA synthetase long-chain family member 5, full insert sequence P
AK161024.1 Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:4432405H02 product:acyl-CoA synthetase long-chain family member 5, full insert sequence P
AK006541.1 Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:1700030F05 product:fatty acid Coenzyme A ligase, long chain 5, full insert sequence P
BC031544.1 Mus musculus acyl-CoA synthetase long-chain family member 5, mRNA (cDNA clone MGC:18968 IMAGE:3987201), complete cds PA

EST sequences (10 of 519) [Show all sequences]

CA563811.1 Clone NIA:K0318C06_IMAGE:30055997 bone 5' read P
CA564703.1 Clone NIA:K0329C06_IMAGE:30057053 bone 5' read
CA569883.1 Clone NIA:K0448E03_IMAGE:30063698 bone marrow 5' read P
CA570185.1 Clone NIA:K0503A01_IMAGE:30064128 bone marrow 5' read P
CA571085.1 Clone NIA:K0515F04_IMAGE:30065343 bone marrow 5' read P
CA571194.1 Clone NIA:K0517A09_IMAGE:30065480 bone marrow 5' read
CA571666.1 Clone NIA:K0523B07_IMAGE:30066066 bone marrow 5' read P
CA571837.1 Clone NIA:K0525E02_IMAGE:30066289 bone marrow 5' read
CA572550.1 Clone NIA:K0536G12_IMAGE:30067379 bone marrow 5' read
CA573231.1 Clone NIA:K0547G06_IMAGE:30068429 bone marrow 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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