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UGID:1073396     UniGene Mm.290897     Mus musculus (mouse)   Cd6
CD6 antigen (Cd6)

Mouse protein-coding gene Cd6. Represented by 93 ESTs from 27 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 1073396 - Mm.290897]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_033982.3 Cd6 gene product M. musculus 100.0 664
NP_006716.3 T-cell differentiation antigen CD6 isoform 1 precursor H. sapiens 73.8 667
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
NP_783167.2 Cd6 gene product R. norvegicus 91.4 664
XP_001144310.1 PREDICTED: T-cell differentiation antigen CD6 isoform 6 P. troglodytes 73.8 667

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: spleen; thymus; skin; uncharacterized tissue; lymph node; mixed; embryonic tissue; mammary gland; salivary gland; intestine; brain; bone marrow; blood
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19 A|19 7.16 cM
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AK088050.1 Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430002N11 product:CD6 antigen, full insert sequence P
AK030823.1 Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830412L18 product:CD6 antigen, full insert sequence P
AK030822.1 Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830412L05 product:T-CELL DIFFERENTIATION ANTIGEN CD6 PRECURSOR, full insert sequence P
U35370.1 Mus musculus T cell accessory signal receptor (CD6) mRNA, complete cds P
AK141213.1 Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330008J18 product:CD6 antigen, full insert sequence P
NM_001037801.2 Mus musculus CD6 antigen (Cd6), transcript variant 1, mRNA P
U12434.1 Mus musculus mscd6 precursor (Cd6) mRNA, complete cds P
U37543.1 Mus musculus T cell surface glycoprotein CD6 mRNA, complete cds P
U37544.1 Mus musculus T cell surface glycoprotein CD6 mRNA, complete cds P
NM_009852.3 Mus musculus CD6 antigen (Cd6), transcript variant 2, mRNA P
BC014294.1 Mus musculus CD6 antigen, mRNA (cDNA clone MGC:14018 IMAGE:4187689), complete cds PA

EST sequences (10 of 93) [Show all sequences]

BY177280.1 Clone F630023C12 uncharacterized tissue 5' read P
BY182264.1 Clone F630101E10 uncharacterized tissue 5' read P
BY187408.1 Clone F630224D17 uncharacterized tissue 5' read P
BY193566.1 Clone F730006I15 skin 5' read P
BY194959.1 Clone F730017B02 skin 5' read P
BY200840.1 Clone F730102E22 skin 5' read P
BY203341.1 Clone F730118E13 skin 5' read P
BY204104.1 Clone F730211K16 skin 5' read P
BY208738.1 Clone F730306C17 skin 5' read P
BY212057.1 Clone F830013J03 spleen 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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