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UGID:1073127     UniGene Mm.290628     Mus musculus (mouse)   Anks3
Ankyrin repeat and sterile alpha motif domain containing 3 (Anks3)

Mouse protein-coding gene Anks3. Represented by 161 ESTs from 82 cDNA libraries. Corresponds to reference sequence NM_028301.4. [UniGene 1073127 - Mm.290628]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_082577.2 ankyrin repeat and SAM domain-containing protein 3 M. musculus 100.0 654
NP_597707.1 ANKS3 gene product H. sapiens 88.2 655
NP_001084639.1 ankyrin repeat and sterile alpha motif domain containing 3 X. laevis 69.5 644
NP_001108037.1 zgc:172142 gene product D. rerio 68.0 562
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
NP_001009676.1 Anks3 gene product R. norvegicus 95.5 662
XP_001516042.1 PREDICTED: ankyrin repeat and SAM domain-containing protein 3-like, partial O. anatinus 91.1 190

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; brain; mammary gland; spleen; mixed; eye; ovary; uncharacterized tissue; thymus; skin; joint; kidney; spinal cord; lung; bone; stomach; heart; pancreas; lymph node; pituitary gland; intestine; nasopharynx; liver
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16 A1|16 2.48 cM
UniSTS entry: Chr 16 RH127060
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (18)

AK089037.1 Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430037D15 product:hypothetical Ankyrin repeat profile/Ankyrin-repeat/Ankyrin repeat region circular profile/Yeast DNA-binding domain containing protein, ... P
BC051143.1 Mus musculus ankyrin repeat and sterile alpha motif domain containing 3, mRNA (cDNA clone MGC:58444 IMAGE:6531161), complete cds PA
BC050929.1 Mus musculus ankyrin repeat and sterile alpha motif domain containing 3, mRNA (cDNA clone MGC:61421 IMAGE:6807194), complete cds PA
AK207623.1 Mus musculus cDNA, clone:Y2G0108J16, strand:unspecified A
AK205602.1 Mus musculus cDNA, clone:Y2G0102D18, strand:unspecified
AK202800.1 Mus musculus cDNA, clone:Y1G0142L20, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000023157, based on BLAT search P
AK198902.1 Mus musculus cDNA, clone:Y1G0129I08, strand:unspecified A
AK197995.1 Mus musculus cDNA, clone:Y1G0126M19, strand:unspecified A
AK184908.1 Mus musculus cDNA, clone:Y0G0131O21, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000023157, based on BLAT search P
AK182539.1 Mus musculus cDNA, clone:Y0G0122M19, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000023157, based on BLAT search P
AK180712.1 Mus musculus cDNA, clone:Y0G0115I08, strand:unspecified
AK179351.1 Mus musculus cDNA, clone:Y0G0110B01, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000023157, based on BLAT search P
AK178375.1 Mus musculus cDNA, clone:Y0G0106H09, strand:unspecified
AK177037.1 Mus musculus cDNA, clone:Y0G0101F23, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000023157, based on BLAT search P
AK012494.1 Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700067D09 product:hypothetical SAM domain (Sterile alpha motif)/Ankyrin-repeat/Yeast DNA-binding domain containing protein, full insert sequence P
BC022691.1 Mus musculus ankyrin repeat and sterile alpha motif domain containing 3, mRNA (cDNA clone IMAGE:4456775), partial cds PA
NM_028301.4 Mus musculus ankyrin repeat and sterile alpha motif domain containing 3 (Anks3), mRNA PA
BC039644.1 Mus musculus ankyrin repeat and sterile alpha motif domain containing 3, mRNA (cDNA clone IMAGE:5364284), containing frame-shift errors PA

EST sequences (10 of 161) [Show all sequences]

BY021154.1 Clone G830046C04 mammary gland 5' read P
BY060692.1 Clone I920011A09 kidney 5' read P
BY075690.1 Clone I920106F16 stomach 5' read P
BY074300.1 Clone I920094C01 mixed 5' read P
BY103548.1 Clone K630151G22 mixed 5' read P
BY104348.1 Clone K630154L20 mixed 5' read P
BY111431.1 Clone L330045F11 embryonic tissue 5' read P
BY135724.1 Clone L930067D16 embryonic tissue 5' read P
BY150202.1 Clone L930274K08 embryonic tissue 5' read P
BY195330.1 Clone F730018M10 skin 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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