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UGID:882157     UniGene Mm.280557     Mus musculus (mouse)   Cdkl3
Cyclin-dependent kinase-like 3 (Cdkl3)

Mouse protein-coding gene Cdkl3. Represented by 107 ESTs from 52 cDNA libraries. Corresponds to 6 reference sequences (different isoforms). [UniGene 882157 - Mm.280557]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001160125.1 cyclin-dependent kinase-like 3 isoform 1 M. musculus 100.0 609
NP_001107047.1 cyclin-dependent kinase-like 3 isoform 1 H. sapiens 88.7 591
NP_001003773.1 cdkl1 gene product D. rerio 58.2 287
NP_505823.1 hypothetical protein Y42A5A.4 C. elegans 52.6 287
XP_001692970.1 flagellar associated protein C. reinhardtii 52.5 255
NP_001188702.1 CG7236, isoform B D. melanogaster 51.4 352
Other hits (2 of 41) [Show all]SpeciesId(%)Len(aa)
NP_068540.1 Cdkl3 gene product R. norvegicus 98.0 456
NP_001179783.1 cyclin-dependent kinase-like 3 B. taurus 92.0 590

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; embryonic tissue; brain; mixed; ovary; thymus; mammary gland; eye; bladder; spinal cord; skin; lung; uncharacterized tissue; extraembryonic tissue; intestine; nasopharynx; liver; kidney
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11 B1.3|11
UniSTS entry: Cdkl3
UniSTS entry: Chr 11 D11Sac5
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (17)

AK078804.1 Mus musculus 16 days embryo lung cDNA, RIKEN full-length enriched library, clone:8430406M17 product:cyclin-dependent kinase-like 3, full insert sequence P
AK050990.1 Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030051A04 product:cyclin-dependent kinase-like 3, full insert sequence P
AK046394.1 Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230379H01 product:cyclin-dependent kinase-like 3, full insert sequence P
AK045356.1 Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230105E16 product:cyclin-dependent kinase-like 3, full insert sequence P
AK043995.1 Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830077E03 product:cyclin-dependent kinase-like 3, full insert sequence P
AK090045.1 Mus musculus CRL-2116 JC cDNA, RIKEN full-length enriched library, clone:G430074B19 product:cyclin-dependent kinase-like 3, full insert sequence P
AK045036.1 Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130020N14 product:cyclin-dependent kinase-like 3, full insert sequence P
AK210497.1 Mus musculus cDNA, clone:Y2G0118K04, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063321, based on BLAT search P
AK186403.1 Mus musculus cDNA, clone:Y0G0137D13, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000063321, based on BLAT search P
AK166428.1 Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length enriched library, clone:G930017H24 product:cyclin-dependent kinase-like 3, full insert sequence P
NM_001166657.1 Mus musculus cyclin-dependent kinase-like 3 (Cdkl3), transcript variant 6, mRNA P
NM_001166656.1 Mus musculus cyclin-dependent kinase-like 3 (Cdkl3), transcript variant 5, mRNA P
NM_001166655.1 Mus musculus cyclin-dependent kinase-like 3 (Cdkl3), transcript variant 4, mRNA P
NM_001166654.1 Mus musculus cyclin-dependent kinase-like 3 (Cdkl3), transcript variant 3, mRNA PA
NM_001166653.1 Mus musculus cyclin-dependent kinase-like 3 (Cdkl3), transcript variant 1, mRNA P
BC028871.1 Mus musculus cyclin-dependent kinase-like 3, mRNA (cDNA clone MGC:28957 IMAGE:4241862), complete cds PA
NM_153785.4 Mus musculus cyclin-dependent kinase-like 3 (Cdkl3), transcript variant 2, mRNA P

EST sequences (10 of 107) [Show all sequences]

BY023562.1 Clone G930017H24 mammary gland 5' read P
BY078796.1 Clone K630016C23 mixed 5' read P
BY093953.1 Clone K630098G10 mixed 5' read
BY106876.1 Clone L330007D07 embryonic tissue 5' read P
BY289652.1 Clone K530053H14 brain 5' read
BY297453.1 Clone K530353A15 brain 5' read
BY299693.1 Clone K720006N16 embryonic tissue 5' read P
BY299917.1 Clone K720008B15 embryonic tissue 5' read P
BY457418.1 Clone K630098G10 mixed 3' read A
BY661067.1 Clone K720006N16 embryonic tissue 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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