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UGID:263047     UniGene Mm.26282     Mus musculus (mouse)   Smagp
Small cell adhesion glycoprotein (Smagp)

Mouse protein-coding gene Smagp. Represented by 116 ESTs from 49 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 263047 - Mm.26282]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_778157.2 small cell adhesion glycoprotein M. musculus 100.0 96
NP_001026798.1 SMAGP gene product H. sapiens 86.6 96
Other hits (2 of 9) [Show all]SpeciesId(%)Len(aa)
NP_877969.1 Smagp gene product R. norvegicus 96.9 96
XP_001493014.2 PREDICTED: small cell adhesion glycoprotein-like E. caballus 92.8 96

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; mammary gland; mixed; ovary; liver; uncharacterized tissue; lung; intestine; fertilized ovum; extraembryonic tissue; stomach; kidney; pancreas; testis; thymus; eye; brain
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 15
Map position: 15 F1|15
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

NM_174992.3 Mus musculus small cell adhesion glycoprotein (Smagp), transcript variant 1, mRNA P
AK139075.1 Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730014D18 product:unclassifiable, full insert sequence
NM_001033872.1 Mus musculus small cell adhesion glycoprotein (Smagp), transcript variant 2, mRNA P
BC132462.1 Mus musculus cDNA sequence BC004728, mRNA (cDNA clone MGC:164093 IMAGE:40130739), complete cds P
BC132460.1 Mus musculus cDNA sequence BC004728, mRNA (cDNA clone MGC:164091 IMAGE:40130737), complete cds P
BC004728.1 Mus musculus cDNA sequence BC004728, mRNA (cDNA clone MGC:7903 IMAGE:3582955), complete cds PA

EST sequences (10 of 116) [Show all sequences]

BY707988.1 Clone 1810074M24 pancreas 5' read P
BX635258.1 Clone LIONp462D03381 uncharacterized tissue 3' read
CF550752.1 Clone IMAGE:30522173 extraembryonic tissue 5' read PA
CF804746.1 stomach 5' read A
CF804747.1 stomach 5' read A
CF981943.1 Clone IMAGE:7031755 testis 5' read
CF982790.1 Clone IMAGE:7033444 testis 5' read
CK129185.1 Clone IMAGE:30788186 extraembryonic tissue 5' read P
CK379246.1 stomach 5' read
CK428223.1 stomach 5' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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