NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy

Query Tips
Build Info
Library Browser
Download UniGene

Related Databases

NIH cDNA Projects
Finding cDNAs

UGID:263026     UniGene Mm.26237     Mus musculus (mouse)   Cry1
Cryptochrome 1 (photolyase-like) (Cry1)

Mouse protein-coding gene Cry1. Represented by 136 ESTs from 64 cDNA libraries. Corresponds to reference sequence NM_007771.3. [UniGene 263026 - Mm.26237]

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_031797.1 Cry1 gene product M. musculus 100.0 605
NP_004066.1 CRY1 gene product H. sapiens 99.2 585
NP_001081129.1 cryptochrome 1 (photolyase-like) X. laevis 95.3 615
NP_001070765.1 cryptochrome 1a isoform 1 D. rerio 93.2 618
NP_477188.1 (6-4)-photolyase, isoform B D. melanogaster 63.1 491
NP_566520.1 (6-4)DNA photolyase A. thaliana 59.7 494
XP_001698054.1 cryptochrome photoreceptor C. reinhardtii 58.4 551
Other hits (2 of 47) [Show all]SpeciesId(%)Len(aa)
NP_942045.2 Cry1 gene product R. norvegicus 99.5 587
XP_509339.2 PREDICTED: cryptochrome-1 P. troglodytes 99.2 585

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; thymus; ovary; brain; mammary gland; kidney; lung; bone; uncharacterized tissue; testis; fertilized ovum; eye; skin; salivary gland; extraembryonic tissue; mixed; bone marrow; pancreas; inner ear; bladder; liver; dorsal root ganglion
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10 C|10 41.63 cM
UniSTS entry: Chr 10 AB000777
UniSTS entry: Chr 10 RH136559
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

BC085499.1 Mus musculus cryptochrome 1 (photolyase-like), mRNA (cDNA clone MGC:102142 IMAGE:6813367), complete cds PA
AK194759.1 Mus musculus cDNA, clone:Y1G0116F12, strand:unspecified
AK133818.1 Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730434M05 product:cryptochrome 1 (photolyase-like), full insert sequence P
AK162460.1 Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430062H16 product:cryptochrome 1 (photolyase-like), full insert sequence P
AB000777.1 Mus musculus mRNA for photolyase/blue-light receptor homolog, complete cds P
NM_007771.3 Mus musculus cryptochrome 1 (photolyase-like) (Cry1), mRNA PA
AF156986.1 Mus musculus cryptochrome 1 (Cry1) mRNA, complete cds P
BC022174.1 Mus musculus cryptochrome 1 (photolyase-like), mRNA (cDNA clone MGC:13933 IMAGE:4036758), complete cds PA

EST sequences (10 of 136) [Show all sequences]

CA578387.1 Clone NIA:K0723A10_IMAGE:30075753 bone marrow 5' read P
BY002901.1 Clone 6620413C23 ovary 5' read
BY015599.1 Clone G830011I20 mammary gland 5' read
BY195452.1 Clone F730019E20 skin 5' read
BY362663.1 Clone B020038I16 embryonic tissue 3' read A
BY385342.1 Clone I1C0008F14 embryonic tissue 3' read A
BY389942.1 Clone I1C0043C16 embryonic tissue 3' read A
BY424018.1 Clone I920071N20 kidney 3' read A
BY469871.1 Clone G270074N06 skin 3' read
BY699893.1 Clone I420119J08 bone 3' read A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help