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UGID:539640     UniGene Mm.262106     Mus musculus (mouse)   Itgam
Integrin alpha M (Itgam)

Mouse protein-coding gene Itgam. Represented by 200 ESTs from 23 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 539640 - Mm.262106]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001076429.1 Itgam gene product M. musculus 100.0 1153
NP_001139280.1 integrin alpha-M isoform 1 precursor H. sapiens 78.2 1152
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
NP_036843.1 Itgam gene product R. norvegicus 90.0 1150
XP_002721795.1 PREDICTED: integrin alpha M O. cuniculus 79.1 1154

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; skin; bone marrow; embryonic tissue; blood; tongue; ascites; spinal cord; mammary gland; eye; heart; mixed; spleen; brain; lung; salivary gland; nasopharynx; intestine
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7|7 F4
UniSTS entry: Itgam
UniSTS entry: Chr 7 Itgam
UniSTS entry: Chr 7 Itgam
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (19)

AK039444.1 Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330043K10 product:integrin alpha M, full insert sequence P
AK089521.1 Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730045J24 product:integrin alpha M, full insert sequence P
AK040921.1 Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530045K20 product:integrin alpha M, full insert sequence P
AK171150.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630228C14 product:integrin alpha M, full insert sequence P
AK171068.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630222D01 product:integrin alpha M, full insert sequence P
AK170324.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630047G22 product:integrin alpha M, full insert sequence P
AK155717.1 Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730209H22 product:integrin alpha M, full insert sequence P
AK155671.1 Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730118F04 product:integrin alpha M, full insert sequence P
AK155520.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630310K16 product:integrin alpha M, full insert sequence P
AK155006.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630115J24 product:integrin alpha M, full insert sequence P
AK154798.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630107B08 product:integrin alpha M, full insert sequence P
AK154474.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630037L20 product:integrin alpha M, full insert sequence P
AK154224.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630010K21 product:integrin alpha M, full insert sequence P
AK146569.1 Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920028E17 product:integrin alpha M, full insert sequence P
BC104148.2 Mus musculus cDNA clone IMAGE:40048932
EF101557.1 Mus musculus CD11b mRNA, partial cds P
BC126892.1 Mus musculus cDNA clone IMAGE:40048935
NM_001082960.1 Mus musculus integrin alpha M (Itgam), transcript variant 1, mRNA P
NM_008401.2 Mus musculus integrin alpha M (Itgam), transcript variant 2, mRNA P

EST sequences (10 of 200) [Show all sequences]

BY162150.1 Clone I830037L19 bone marrow 5' read P
BY176729.1 Clone F630020G09 uncharacterized tissue 5' read P
BY177542.1 Clone F630024K22 uncharacterized tissue 5' read P
BY177575.1 Clone F630024P13 uncharacterized tissue 5' read P
BY178516.1 Clone F630030C13 uncharacterized tissue 5' read P
BY179853.1 Clone F630036O09 uncharacterized tissue 5' read P
BY180353.1 Clone F630039O21 uncharacterized tissue 5' read P
BY180988.1 Clone F630043I21 uncharacterized tissue 5' read P
BY181084.1 Clone F630044E10 uncharacterized tissue 5' read P
BY181098.1 Clone F630044F24 uncharacterized tissue 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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