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UGID:337659     UniGene Mm.251013     Mus musculus (mouse)   Kpnb1
Karyopherin (importin) beta 1 (Kpnb1)

Mouse protein-coding gene Kpnb1. Represented by 1121 ESTs from 240 cDNA libraries. Corresponds to reference sequence NM_008379.3. [UniGene 337659 - Mm.251013]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_032405.3 Kpnb1 gene product M. musculus 100.0 875
XP_002719171.1 PREDICTED: karyopherin beta 1 O. cuniculus 99.9 880
XP_003912944.1 PREDICTED: importin subunit beta-1 isoform 1 P. anubis 99.9 875
NP_002256.2 KPNB1 gene product H. sapiens 99.9 875
XP_548162.2 PREDICTED: importin subunit beta-1 isoform 1 C. lupus familiaris 99.9 875
XP_003131576.3 PREDICTED: importin subunit beta-1-like isoform 1 S. scrofa 99.9 875
NP_001180082.1 importin subunit beta-1 B. taurus 99.9 875
NP_058759.1 Kpnb1 gene product R. norvegicus 99.9 874
XP_001082833.2 PREDICTED: importin subunit beta-1 M. mulatta 99.9 842
XP_003315429.1 PREDICTED: importin subunit beta-1 isoform 1 P. troglodytes 99.9 730
XP_003362442.1 PREDICTED: importin subunit beta-1 E. caballus 99.9 730
XP_004012868.1 PREDICTED: importin subunit beta-1 isoform 1 O. aries 99.9 730
NP_001108315.1 karyopherin (importin) beta 1 X. laevis 97.2 875
NP_001032791.2 importin subunit beta-1 D. rerio 96.1 875
NP_477496.1 female sterile (2) ketel, isoform A D. melanogaster 68.6 876
NP_491477.2 Protein IMB-1 C. elegans 57.5 885
NP_001154597.1 armadillo/beta-catenin-like repeat-containing protein A. thaliana 47.7 868
XP_964876.1 hypothetical protein NCU02011 N. crassa 46.0 869
Other hits (2 of 43) [Show all]SpeciesId(%)Len(aa)
XP_001366856.1 PREDICTED: importin subunit beta-1 M. domestica 99.4 875
XP_003643296.1 PREDICTED: importin subunit beta-1-like G. gallus 99.4 842

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; brain; eye; mixed; intestine; mammary gland; pancreas; uncharacterized tissue; bone marrow; spleen; extraembryonic tissue; lung; skin; thymus; bone; ovary; stomach; testis; kidney; heart; lymph node; pituitary gland; fertilized ovum; adipose tissue; salivary gland; liver; inner ear; molar; blood; spinal cord; nasopharynx; connective tissue; tongue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11|11 D
UniSTS entry: Chr 11 RH124909
UniSTS entry: Chr 11 UniSTS:225255
UniSTS entry: Chr 11 STS-H47054
UniSTS entry: Chr 11 RH140066
UniSTS entry: Chr 11 RH141392
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AK077709.1 Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730542J02 product:importin beta, full insert sequence P
BC052438.1 Mus musculus karyopherin (importin) beta 1, mRNA (cDNA clone MGC:63345 IMAGE:6405935), complete cds PA
BC052711.1 Mus musculus karyopherin (importin) beta 1, mRNA (cDNA clone MGC:64644 IMAGE:6835239), complete cds PA
BC055115.1 Mus musculus karyopherin (importin) beta 1, mRNA (cDNA clone MGC:59352 IMAGE:6518750), complete cds PA
AK167901.1 Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730036A17 product:karyopherin (importin) beta 1, full insert sequence
AK147175.1 Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920194D23 product:karyopherin (importin) beta 1, full insert sequence P
AK169171.1 Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920087J04 product:karyopherin (importin) beta 1, full insert sequence P
D45836.1 Mus musculus mRNA for nuclear pore-targeting complex component of 97kDa, complete cds P
NM_008379.3 Mus musculus karyopherin (importin) beta 1 (Kpnb1), mRNA P
BC004096.1 Mus musculus karyopherin (importin) beta 1, mRNA (cDNA clone IMAGE:3594201), complete cds A

EST sequences (10 of 1121) [Show all sequences]

CA563776.1 Clone NIA:K0317H03_IMAGE:30055958 bone 5' read P
CA566932.1 Clone NIA:K0407F12_IMAGE:30059783 bone marrow 5' read
CA568294.1 Clone NIA:K0426B02_IMAGE:30061549 bone marrow 5' read P
CA569431.1 Clone NIA:K0443B10_IMAGE:30063189 bone marrow 5' read
CA569455.1 Clone NIA:K0443E01_IMAGE:30063216 bone marrow 5' read P
CA569616.1 Clone NIA:K0445D08_IMAGE:30063403 bone marrow 5' read P
CA571893.1 Clone NIA:K0526C12_IMAGE:30066371 bone marrow 5' read P
CA576208.1 Clone NIA:K0641E01_IMAGE:30072720 bone marrow 5' read P
CA752407.1 Clone IMAGE:6831285 brain 5' read P
BY050844.1 Clone I730062H02 thymus 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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