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UGID:332361     UniGene Mm.245355     Mus musculus (mouse)   Chid1
Chitinase domain containing 1 (Chid1)

Mouse protein-coding gene Chid1. Represented by 236 ESTs from 117 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 332361 - Mm.245355]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001136153.1 chitinase domain-containing protein 1 isoform 1 precursor M. musculus 100.0 395
NP_076436.3 chitinase domain-containing protein 1 isoform a precursor H. sapiens 92.6 392
NP_001087530.1 chitinase domain-containing protein 1 precursor X. laevis 68.5 386
NP_956351.1 chid1 gene product D. rerio 61.4 390
NP_609190.2 CG8460 D. melanogaster 46.7 394
Other hits (2 of 39) [Show all]SpeciesId(%)Len(aa)
NP_001041319.2 Chid1 gene product R. norvegicus 99.5 395
XP_003432503.1 PREDICTED: chitinase domain-containing protein 1 C. lupus familiaris 92.9 392

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; mixed; pancreas; bone marrow; kidney; eye; mammary gland; heart; tongue; liver; uncharacterized tissue; pineal gland; muscle; pituitary gland; spleen; thymus; bone; spinal cord; ovary; dorsal root ganglion; stomach; skin; joint; lung; adipose tissue; intestine; salivary gland; extraembryonic tissue; connective tissue; uterus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7 F5|7
UniSTS entry: Chr 7 RH142859
UniSTS entry: Chr 7 RH126879
UniSTS entry: Chr 9 D9Mit34.1 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

AK050655.1 Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:C920030A14 product:hypothetical (Trans)glycosidases structure containing protein, full insert sequence P
AK040002.1 Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430041O13 product:unclassifiable, full insert sequence
AK036717.1 Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830166G06 product:GL008 homolog [Homo sapiens], full insert sequence P
AK014141.1 Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110038G22 product:RIKEN cDNA 3110023E09 gene, full insert sequence P
BC061063.1 Mus musculus chitinase domain containing 1, mRNA (cDNA clone MGC:74175 IMAGE:6591338), complete cds PA
AK218239.1 Mus musculus cDNA, clone:Y2G0144H24, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000026586, based on BLAT search
AK205869.1 Mus musculus cDNA, clone:Y2G0103A18, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000064642, based on BLAT search
AK193697.1 Mus musculus cDNA, clone:Y1G0113B14, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000064642, based on BLAT search P
AK160200.1 Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510044G16 product:GL008 homolog [Homo sapiens], full insert sequence P
AK160156.1 Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810006L13 product:GL008 homolog [Homo sapiens], full insert sequence P
NM_001142681.1 Mus musculus chitinase domain containing 1 (Chid1), transcript variant 1, mRNA PA
AK014071.1 Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110023E09 product:hypothetical (Trans)glycosidases structure containing protein, full insert sequence P
NM_026522.5 Mus musculus chitinase domain containing 1 (Chid1), transcript variant 2, mRNA PA
BC006876.1 Mus musculus chitinase domain containing 1, mRNA (cDNA clone MGC:6792 IMAGE:2647540), complete cds PA

EST sequences (10 of 236) [Show all sequences]

BY006173.1 Clone F520005J05 kidney 5' read
BY101128.1 Clone K630136E18 kidney 5' read P
BY144852.1 Clone L930194P13 embryonic tissue 5' read P
BY253203.1 Clone K330004P11 brain 5' read P
BY274438.1 Clone K430307A12 brain 5' read P
BY321230.1 Clone L030006D24 connective tissue 5' read P
BY324468.1 Clone L030025B01 connective tissue 5' read P
BY343982.1 Clone L730001G10 joint 5' read
BY344055.1 Clone L730001O12 joint 5' read P
BY345705.1 Clone L730015M14 joint 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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