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UGID:261732     UniGene Mm.23809     Mus musculus (mouse)   Nfu1
NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) (Nfu1)

Mouse protein-coding gene Nfu1. Represented by 151 ESTs from 85 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 261732 - Mm.23809]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001164062.1 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 1 precursor M. musculus 100.0 255
NP_001002755.1 NFU1 gene product H. sapiens 95.7 253
NP_001116180.1 nfu1 gene product D. rerio 80.7 212
NP_728443.1 CG32857 D. melanogaster 68.2 245
NP_501917.1 Protein LPD-8 C. elegans 62.5 208
XP_001690805.1 iron-sulfur cluster assembly protein C. reinhardtii 58.5 224
XP_957202.1 HIRA-interacting protein 5 N. crassa 58.1 210
NP_175550.2 NifU-like protein 5 A. thaliana 57.8 251
Other hits (2 of 59) [Show all]SpeciesId(%)Len(aa)
NP_001100076.2 Nfu1 gene product R. norvegicus 98.0 252
XP_525775.1 PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 8 P. troglodytes 96.0 253

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; mammary gland; brain; testis; extraembryonic tissue; liver; eye; spleen; stomach; ovary; thymus; kidney; pancreas; lymph node; heart; blood; muscle; intestine; mixed; skin; pituitary gland; lung; uncharacterized tissue; connective tissue; thyroid; bone; other; spinal cord; inner ear
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6|6 D2
UniSTS entry: Chr 15 AU022699
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AK081950.1 Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130089D18 product:unclassifiable, full insert sequence
AK002244.1 Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610006G17 product:histone cell cycle regulation defective interacting protein 5, full insert sequence P
AY335195.1 Mus musculus NifU-like protein HIRIP5 (Hirip5) mRNA, partial cds PA
AK180369.1 Mus musculus cDNA, clone:Y0G0113P07, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000032060, based on BLAT search
AK168624.1 Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920039C19 product:hypothetical protein, full insert sequence
AK145558.1 Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0015J22 product:histone cell cycle regulation defective interacting protein 5, full insert sequence P
NM_001170591.1 Mus musculus NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) (Nfu1), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA PA
AJ132616.1 Mus musculus mRNA for HIRA-interacting protein (HIRIP5) P
NM_020045.3 Mus musculus NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) (Nfu1), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA PA
AK003730.1 Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110015O06 product:histone cell cycle regulation defective interacting protein 5, full insert sequence P
BC018355.1 Mus musculus NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae), mRNA (cDNA clone MGC:5675 IMAGE:3584656), complete cds PA

EST sequences (10 of 151) [Show all sequences]

BY007416.1 Clone G430031K06 connective tissue 5' read P
BY018025.1 Clone G830026A16 mammary gland 5' read P
BY043446.1 Clone I730028I22 spleen 5' read P
BY046592.1 Clone I730042L13 thymus 5' read P
BY048676.1 Clone I730051I20 spleen 5' read P
BY059034.1 Clone I730098M15 spleen 5' read P
BY078146.1 Clone K630013B15 kidney 5' read P
BY176759.1 Clone F630020I15 uncharacterized tissue 5' read P
BY186266.1 Clone F630217P09 uncharacterized tissue 5' read P
BY248858.1 Clone K230320D02 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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