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UGID:319621     UniGene Mm.229342     Mus musculus (mouse)   Tcp1
T-complex protein 1 (Tcp1)

Mouse protein-coding gene Tcp1. Represented by 1588 ESTs from 317 cDNA libraries. Corresponds to reference sequence NM_013686.3. [UniGene 319621 - Mm.229342]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_038714.2 Tcp1 gene product M. musculus 100.0 555
NP_110379.2 TCP1 gene product H. sapiens 98.7 555
NP_571305.1 tcp1 gene product D. rerio 94.6 555
NP_001080978.1 t-complex 1 X. laevis 94.2 554
NP_524450.2 Tcp1-like, isoform A D. melanogaster 82.0 554
XP_001690556.1 T-complex protein 1, alpha subunit C. reinhardtii 75.4 545
NP_495722.1 Protein CCT-1 C. elegans 74.5 544
NP_188640.1 T-complex protein 1 subunit alpha A. thaliana 74.5 543
XP_955906.2 T-complex protein 1 subunit alpha N. crassa 71.6 563
NP_010498.1 Tcp1p S. cerevisiae 70.2 546
Other hits (2 of 63) [Show all]SpeciesId(%)Len(aa)
NP_036802.1 Tcp1 gene product R. norvegicus 99.5 555
XP_001098115.1 PREDICTED: t-complex protein 1 subunit alpha isoform 6 M. mulatta 98.7 555

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; testis; brain; bone marrow; mixed; spleen; mammary gland; thymus; lung; kidney; eye; connective tissue; skin; liver; heart; pancreas; extraembryonic tissue; uncharacterized tissue; blood; lymph node; bladder; epididymis; spinal cord; dorsal root ganglion; stomach; inner ear; muscle; ovary; intestine; prostate; bone; tongue; joint; pituitary gland; nasopharynx; salivary gland; sympathetic ganglion; artery
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17 A3-B|17 8.72 cM
UniSTS entry: Chr 17 AI528772
UniSTS entry: Chr 17 TCP1
UniSTS entry: Chr 17 AW742799
UniSTS entry: Chr 9 D10Mit157.2 [Map Viewer]
UniSTS entry: GDB:451649
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (26)

AK203991.1 Mus musculus cDNA, clone:Y1G0146P12, strand:unspecified
AK199928.1 Mus musculus cDNA, clone:Y1G0132M23, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007003, based on BLAT search P
AK178327.1 Mus musculus cDNA, clone:Y0G0106E09, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000007003, based on BLAT search P
AK165665.1 Mus musculus RCB-0035 WEHI-3 cDNA, RIKEN full-length enriched library, clone:G430121O08 product:t-complex protein 1, full insert sequence P
AK153037.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830119L09 product:t-complex protein 1, full insert sequence P
AK152641.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830081K16 product:t-complex protein 1, full insert sequence P
AK152633.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830081I21 product:t-complex protein 1, full insert sequence P
AK152759.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830083P13 product:t-complex protein 1, full insert sequence P
AK149755.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530015C19 product:t-complex protein 1, full insert sequence P
AK151903.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830042H02 product:t-complex protein 1, full insert sequence P
AK149611.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530001M14 product:t-complex protein 1, full insert sequence P
AK167529.1 Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530018N11 product:t-complex protein 1, full insert sequence P
AK163282.1 Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library, clone:B020009D19 product:unclassifiable, full insert sequence
AK151445.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830030D15 product:t-complex protein 1, full insert sequence P
AK163149.1 Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730037G02 product:t-complex protein 1, full insert sequence
AK151068.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830022H06 product:t-complex protein 1, full insert sequence P
AK166966.1 Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0025N07 product:t-complex protein 1, full insert sequence P
AK166828.1 Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0015J24 product:t-complex protein 1, full insert sequence P
AK150744.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830014M07 product:t-complex protein 1, full insert sequence P
AK150666.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830013G22 product:t-complex protein 1, full insert sequence P
AK153430.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830160D23 product:t-complex protein 1, full insert sequence P
D90344.1 Mus musculus mRNA for t-complex polypeptide 1A, complete cds P
M20130.1 Mouse t complex polypeptide 1 (Tcp-1-a) mRNA, 3' end P
M12899.1 Mouse t complex polypeptide 1 (Tcp-1-b) mRNA, complete cds P
NM_013686.3 Mus musculus t-complex protein 1 (Tcp1), mRNA P
BC003809.1 Mus musculus t-complex protein 1, mRNA (cDNA clone MGC:6094 IMAGE:3599670), complete cds PA

EST sequences (10 of 1588) [Show all sequences]

CA565714.1 Clone NIA:K0341E01_IMAGE:30058224 bone 5' read P
CA565891.1 Clone NIA:K0343E06_IMAGE:30058421 bone 5' read P
CA570610.1 Clone NIA:K0508E11_IMAGE:30064666 bone marrow 5' read P
CA748238.1 brain P
BY000602.1 Clone 1020010K11 heart 5' read
BY002012.1 Clone 6620405C13 ovary 5' read
BY002496.1 Clone 6620409O08 ovary 5' read P
BY005199.1 Clone F420003D04 spleen 5' read P
BY010448.1 Clone G730020C02 lung 5' read P
BY010789.1 Clone G730022E14 lung 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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