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UGID:318438     UniGene Mm.227738     Mus musculus (mouse)   Cpt1b
Carnitine palmitoyltransferase 1b, muscle (Cpt1b)

Mouse protein-coding gene Cpt1b. Represented by 69 ESTs from 38 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 318438 - Mm.227738]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_034078.2 carnitine O-palmitoyltransferase 1, muscle isoform M. musculus 100.0 771
NP_001138607.1 carnitine O-palmitoyltransferase 1, muscle isoform isoform a H. sapiens 88.6 771
NP_001088630.1 carnitine palmitoyltransferase 1B (muscle) X. laevis 67.4 764
XP_002666893.2 PREDICTED: carnitine O-palmitoyltransferase 1, liver isoform D. rerio 66.9 767
NP_523685.2 withered, isoform A D. melanogaster 56.8 761
NP_496721.2 Protein CPT-1 C. elegans 49.5 768
Other hits (2 of 39) [Show all]SpeciesId(%)Len(aa)
NP_001187079.1 40S ribosomal protein S15a I. punctatus 98.2 57
NP_001134159.1 40S ribosomal protein S15a S. salar 96.5 57

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: heart; embryonic tissue; mixed; testis; eye; lymph node; adrenal gland; skin; bone marrow; kidney; salivary gland; mammary gland; muscle; thyroid; uncharacterized tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 15
Map position: 15 E3|15 44.89 cM
UniSTS entry: Chr 15 Cpt1b
UniSTS entry: Cpt1b
UniSTS entry: Chr 15 MARC_16689-16690:1017862088:1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AK029141.1 Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732496N06 product:carnitine palmitoyltransferase 1, muscle, full insert sequence P
AK146851.1 Mus musculus 16 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920064J20 product:carnitine palmitoyltransferase 1b, muscle, full insert sequence P
NR_004843.2 Mus musculus cDNA sequence BC090627 (BC090627), non-coding RNA PA
NM_009948.2 Mus musculus carnitine palmitoyltransferase 1b, muscle (Cpt1b), nuclear gene encoding mitochondrial protein, mRNA PA
AB010826.1 Mus musculus mRNA for muscle type carnitine palmitoyltransferase I, complete cds P
AF017174.2 Mus musculus carnitine palmitoyltransferase I mRNA, complete cds P
BC018270.1 Mus musculus carnitine palmitoyltransferase 1b, muscle, mRNA (cDNA clone MGC:25227 IMAGE:4920625), complete cds PA

EST sequences (10 of 69) [Show all sequences]

BY073567.1 Clone I920089N06 heart 5' read P
BY088681.1 Clone K630071J22 heart 5' read P
BY090464.1 Clone K630081H22 heart 5' read P
BY148757.1 Clone L930253F18 embryonic tissue 5' read P
BY427409.1 Clone I920089N06 heart 3' read A
BY434325.1 Clone I920133E22 heart 3' read A
BY739955.1 Clone I920064J20 heart 5' read P
BY760263.1 Clone I920064J20 heart 3' read PA
BY114488.1 Clone L430029B19 embryonic tissue 5' read P
CB589332.1 Clone IMAGE:30286895 embryonic tissue 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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