NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:317476     UniGene Mm.225505     Mus musculus (mouse)   Chka
Choline kinase alpha (Chka)

Mouse protein-coding gene Chka. Represented by 232 ESTs from 107 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 317476 - Mm.225505]

SELECTED PROTEIN SIMILARITIES
GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; mammary gland; brain; eye; thymus; testis; uncharacterized tissue; mixed; pancreas; inner ear; bone marrow; liver; muscle; skin; stomach; kidney; lung; blood; oviduct; intestine; tongue; spleen; spinal cord; nasopharynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19 A|19 3.57 cM
UniSTS entry: Chr 19 RH125233
UniSTS entry: Chr 19 Chk
UniSTS entry: Chr 19 UniSTS:225274
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

AK216139.1 Mus musculus cDNA, clone:Y2G0137F10, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000025828, based on BLAT search P
AK215104.1 Mus musculus cDNA, clone:Y2G0133P17, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000025760, based on BLAT search
AK192596.1 Mus musculus cDNA, clone:Y1G0109F23, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000025760, based on BLAT search
AK186560.1 Mus musculus cDNA, clone:Y0G0137M15, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000025828, based on BLAT search
AK184298.1 Mus musculus cDNA, clone:Y0G0129G17, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000025828, based on BLAT search P
AK183891.1 Mus musculus cDNA, clone:Y0G0127L15, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000025828, based on BLAT search
AK183570.1 Mus musculus cDNA, clone:Y0G0126G10, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000025828, based on BLAT search
AK182174.1 Mus musculus cDNA, clone:Y0G0121B08, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000025828, based on BLAT search
AK178697.1 Mus musculus cDNA, clone:Y0G0107J19, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000025760, based on BLAT search P
AK166465.1 Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length enriched library, clone:G930025K06 product:choline kinase alpha, full insert sequence P
NR_073190.1 Mus musculus choline kinase alpha (Chka), transcript variant 4, non-coding RNA A
NM_001271496.1 Mus musculus choline kinase alpha (Chka), transcript variant 3, mRNA A
AB011002.1 Mus musculus mRNA for choline kinase, complete cds P
NM_013490.4 Mus musculus choline kinase alpha (Chka), transcript variant 1, mRNA PA
AK005057.1 Mus musculus adult male liver cDNA, RIKEN full-length enriched library, clone:1300019C14 product:choline kinase, full insert sequence P
BC004719.1 Mus musculus choline kinase alpha, mRNA (cDNA clone IMAGE:3582342), partial cds PA

EST sequences (10 of 232) [Show all sequences]

CA567919.1 Clone NIA:K0420B12_IMAGE:30060983 bone marrow 5' read P
BY010943.1 Clone G730023C19 lung 5' read
BY016387.1 Clone G830016N19 mammary gland 5' read
BY061557.1 Clone I920017P09 mixed 5' read P
BY066606.1 Clone I920049K24 mixed 5' read P
BY233100.1 Clone F930029A03 inner ear 5' read P
BY233430.1 Clone F930030I08 inner ear 5' read
BY353992.1 Clone 1700094C19 testis 3' read P
BY366059.1 Clone E860121O04 embryonic tissue 3' read A
BY385659.1 Clone I1C0010A02 embryonic tissue 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help