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UGID:256660     UniGene Mm.2254     Mus musculus (mouse)   Emr1
EGF-like module containing, mucin-like, hormone receptor-like sequence 1 (Emr1)

Mouse protein-coding gene Emr1. Represented by 291 ESTs from 51 cDNA libraries. Corresponds to reference sequence NM_010130.4. [UniGene 256660 - Mm.2254]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_034260.1 Emr1 gene product M. musculus 100.0 930
NP_001965.3 EMR1 gene product H. sapiens 74.3 885
Other hits (2 of 11) [Show all]SpeciesId(%)Len(aa)
NP_001007558.1 Emr1 gene product R. norvegicus 92.8 931
XP_001151481.1 PREDICTED: egf-like module containing, mucin-like, hormone receptor-like 1 isoform 3 P. troglodytes 74.7 885

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: skin; bone marrow; uncharacterized tissue; thymus; mixed; brain; testis; mammary gland; bone; lymph node; prostate; embryonic tissue; spleen; liver; blood; eye; heart; muscle; dorsal root ganglion; oviduct; lung; connective tissue; kidney
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17 D|17 29.8 cM
UniSTS entry: Chr 17 X93328
UniSTS entry: Chr 17 X93328
UniSTS entry: Chr 17 U66888
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

U66892.1 Mus musculus Emr1 mRNA, alternatively spliced fragment C, partial cds P
U66891.1 Mus musculus Emr1 mRNA, alternatively spliced fragment B2, partial cds P
U66890.1 Mus musculus Emr1 mRNA, alternatively spliced fragment B1, partial cds P
U66889.1 Mus musculus Emr1 mRNA, alternatively spliced fragment A, partial cds P
NM_010130.4 Mus musculus EGF-like module containing, mucin-like, hormone receptor-like sequence 1 (Emr1), mRNA PA
BC075688.1 Mus musculus EGF-like module containing, mucin-like, hormone receptor-like sequence 1, mRNA (cDNA clone MGC:100047 IMAGE:30609706), complete cds PA
AK133202.1 Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932412M17 product:EGF-like module containing, mucin-like, hormone receptor-like sequence 1, full insert sequence P
AK155862.1 Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730310N12 product:EGF-like module containing, mucin-like, hormone receptor-like sequence 1, full insert sequence P
AK170265.1 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630039I20 product:unclassifiable, full insert sequence
AK149898.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530102L24 product:EGF-like module containing, mucin-like, hormone receptor-like sequence 1, full insert sequence P
AK151682.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830033L06 product:EGF-like module containing, mucin-like, hormone receptor-like sequence 1, full insert sequence P
AK151303.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830027N07 product:EGF-like module containing, mucin-like, hormone receptor-like sequence 1, full insert sequence P
DQ167573.1 Mus musculus cell surface glycoprotein F4/80 mRNA, partial cds P
X93328.1 M.musculus mRNA for F4/80 PA
U66888.1 Mus musculus Emr1 mRNA, complete cds PA

EST sequences (10 of 291) [Show all sequences]

BY081681.1 Clone K630034F09 mixed 5' read P
BY084763.1 Clone K630049N20 heart 5' read P
BY154536.1 Clone G530102L24 bone marrow 5' read P
BY155377.1 Clone I830003E19 bone marrow 5' read P
BY155603.1 Clone I830004F09 bone marrow 5' read P
BY155815.1 Clone I830005B09 bone marrow 5' read P
BY156241.1 Clone I830007E14 bone marrow 5' read P
BY156461.1 Clone I830008I21 bone marrow 5' read P
BY156491.1 Clone I830008L19 bone marrow 5' read P
BY156650.1 Clone I830009I10 bone marrow 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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