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UGID:314687     UniGene Mm.219672     Mus musculus (mouse)   Mtmr1
Myotubularin related protein 1 (Mtmr1)

Mouse protein-coding gene Mtmr1. Represented by 165 ESTs from 95 cDNA libraries. Corresponds to reference sequence NM_016985.2. [UniGene 314687 - Mm.219672]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_058681.1 Mtmr1 gene product M. musculus 100.0 668
NP_003819.1 MTMR1 gene product H. sapiens 95.5 664
NP_001014352.1 mtmr1b gene product D. rerio 77.0 643
NP_001089410.1 myotubularin X. laevis 70.0 599
NP_523489.1 myotubularin D. melanogaster 62.5 601
NP_491531.2 Protein MTM-1 C. elegans 51.5 569
Other hits (2 of 48) [Show all]SpeciesId(%)Len(aa)
XP_001499440.1 PREDICTED: myotubularin-related protein 1-like E. caballus 96.6 615
XP_002721385.1 PREDICTED: myotubularin-related protein 1 O. cuniculus 95.8 645

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; eye; mammary gland; skin; bone marrow; thymus; bone; kidney; spleen; mixed; uncharacterized tissue; bladder; lung; uterus; blood; pancreas; testis; dorsal root ganglion; liver; ovary; adipose tissue; spinal cord; intestine; nasopharynx
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: X A7.2|X
UniSTS entry: Mtmr1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

AK082753.1 Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:C330004J02 product:myotubularin related protein 1, full insert sequence P
AK051390.1 Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130045I15 product:myotubularin related protein 1, full insert sequence P
AK048714.1 Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230015P16 product:myotubularin related protein 1, full insert sequence P
AY099894.1 Mus musculus myotubularin-related 1 isoform B (Mtmr1) mRNA, partial cds; alternatively spliced P
AY099895.1 Mus musculus myotubularin-related 1 isoform C (Mtmr1) mRNA, partial cds; alternatively spliced P
AY099896.1 Mus musculus myotubularin-related 1 isoform D (Mtmr1) mRNA, partial cds; alternatively spliced P
AY099897.1 Mus musculus myotubularin-related 1 isoform E (Mtmr1) mRNA, partial cds; alternatively spliced P
AY099898.1 Mus musculus myotubularin-related 1 isoform F (Mtmr1) mRNA, partial cds; alternatively spliced P
BC056376.1 Mus musculus myotubularin related protein 1, mRNA (cDNA clone MGC:73476 IMAGE:6849757), complete cds PA
BC057337.1 Mus musculus myotubularin related protein 1, mRNA (cDNA clone MGC:66969 IMAGE:6825916), complete cds PA
AF073997.1 Mus musculus myotubularin related protein 1 isoform A (Mtmr1) mRNA, complete cds; alternatively spliced P
NM_016985.2 Mus musculus myotubularin related protein 1 (Mtmr1), mRNA PA

EST sequences (10 of 165) [Show all sequences]

BY013818.1 Clone G730041L04 lung 5' read
BY021936.1 Clone G830050D11 mammary gland 5' read
BY040870.1 Clone I730017D04 mixed 5' read P
BY165327.1 Clone I830056F09 bone marrow 5' read
BY369879.1 Clone F530108O21 kidney 3' read
BY409713.1 Clone I730077D21 spleen 3' read
BY418961.1 Clone I920041J07 liver 3' read
BY471935.1 Clone G270109M09 skin 3' read
BY502224.1 Clone I830076L06 bone marrow 3' read
BY509166.1 Clone I830110G07 bone marrow 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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