NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:308665     UniGene Mm.210018     Mus musculus (mouse)   Fermt2
Fermitin family homolog 2 (Drosophila) (Fermt2)

Mouse protein-coding gene Fermt2. Represented by 295 ESTs from 137 cDNA libraries. Corresponds to reference sequence NM_146054.2. [UniGene 308665 - Mm.210018]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_666166.2 Fermt2 gene product M. musculus 100.0 679
NP_001011915.1 Fermt2 gene product R. norvegicus 99.7 679
NP_006823.1 fermitin family homolog 2 isoform 1 H. sapiens 99.3 679
NP_001086955.1 fermitin family member 2 X. laevis 95.5 686
XP_685536.3 PREDICTED: fermitin family homolog 2 isoform 1 D. rerio 92.0 683
NP_728936.1 fermitin 1, isoform A D. melanogaster 56.8 702
NP_506628.1 Protein UNC-112 C. elegans 53.0 708
Other hits (2 of 35) [Show all]SpeciesId(%)Len(aa)
NP_001253248.1 fermitin family homolog 2 M. mulatta 99.3 679
XP_003314375.1 PREDICTED: fermitin family homolog 2 isoform 3 P. troglodytes 99.3 679

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; mammary gland; mixed; brain; joint; extraembryonic tissue; eye; connective tissue; fertilized ovum; pancreas; kidney; testis; molar; spleen; liver; ovary; prostate; heart; muscle; uterus; epididymis; bladder; spinal cord; lung; bone; inner ear; skin; artery; thymus; uncharacterized tissue; adrenal gland; salivary gland; nasopharynx; sympathetic ganglion
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 14
Map position: 14 C1|14
UniSTS entry: Plekhc1
UniSTS entry: Plekhc1
UniSTS entry: Ndufb11
UniSTS entry: Chr 9 D10Mit157.2 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AK079588.1 Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330031N05 product:mitogen inducible gene mig-2 homolog [Homo sapiens], full insert sequence P
AK087720.1 Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330011A14 product:unclassifiable, full insert sequence
AK165608.1 Mus musculus kidney CCL-142 RAG cDNA, RIKEN full-length enriched library, clone:G430056I22 product:pleckstrin homology domain containing, family C (with FERM domain) member 1, full insert sequence P
AK145030.1 Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830028B12 product:pleckstrin homology domain containing, family C (with FERM domain) member 1, full insert sequence P
AK166552.1 Mus musculus 1 cell embryo 1 cell cDNA, RIKEN full-length enriched library, clone:I0C0021G03 product:pleckstrin homology domain containing, family C (with FERM domain) member 1, full insert sequence P
BC034168.1 Mus musculus fermitin family homolog 2 (Drosophila), mRNA (cDNA clone IMAGE:5029834), complete cds PA
NM_146054.2 Mus musculus fermitin family homolog 2 (Drosophila) (Fermt2), mRNA P
BC033436.1 Mus musculus fermitin family homolog 2 (Drosophila), mRNA (cDNA clone MGC:36544 IMAGE:4950810), complete cds PA

EST sequences (10 of 295) [Show all sequences]

CA563557.1 Clone NIA:K0315C09_IMAGE:30055712 bone 5' read P
CA564254.1 Clone NIA:K0324A03_IMAGE:30056546 bone 5' read P
CA786548.1 Clone IMAGE:6756006 heart 5' read
BY220166.1 Clone F830120L19 spleen 5' read P
BY223460.1 Clone F830303L18 spleen 5' read P
BY229532.1 Clone F930002J18 inner ear 5' read P
BY241982.1 Clone K230029O14 brain 5' read P
BY301704.1 Clone K820001B10 embryonic tissue 5' read P
BY302840.1 Clone K820006C08 embryonic tissue 5' read P
BY325082.1 Clone L030029C24 connective tissue 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help