NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:305916     UniGene Mm.202337     Mus musculus (mouse)   Ppat
Phosphoribosyl pyrophosphate amidotransferase (Ppat)

Mouse protein-coding gene Ppat. Represented by 252 ESTs from 110 cDNA libraries. Corresponds to reference sequence NM_172146.2. [UniGene 305916 - Mm.202337]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_742158.1 phosphoribosyl pyrophosphate amidotransferase M. musculus 100.0 516
NP_002694.3 amidophosphoribosyltransferase proprotein H. sapiens 96.1 516
NP_001083491.1 phosphoribosyl pyrophosphate amidotransferase X. laevis 88.4 507
NP_001076346.2 ppat gene product D. rerio 79.3 507
NP_524271.2 phosphoribosylamidotransferase, isoform A D. melanogaster 69.3 523
NP_497958.1 Protein T04A8.5 C. elegans 53.4 478
NP_195200.1 amidophosphoribosyltransferase A. thaliana 45.8 448
Other hits (2 of 42) [Show all]SpeciesId(%)Len(aa)
NP_476546.1 Ppat gene product R. norvegicus 98.1 516
XP_001085606.1 PREDICTED: amidophosphoribosyltransferase M. mulatta 95.5 516

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; mixed; kidney; thymus; connective tissue; mammary gland; testis; pancreas; uncharacterized tissue; spleen; bone marrow; eye; bone; heart; extraembryonic tissue; skin; brain; muscle; liver; lung; salivary gland; blood; nasopharynx; inner ear; tongue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5 C3.3|5
UniSTS entry: Chr 5 RH126767
UniSTS entry: Chr 5 RH124742
UniSTS entry: Chr 5 AI507113
UniSTS entry: Ndufb11
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

NM_172146.2 Mus musculus phosphoribosyl pyrophosphate amidotransferase (Ppat), mRNA PA
BC006053.1 Mus musculus cDNA clone IMAGE:3590915, containing frame-shift errors PA
AK216394.1 Mus musculus cDNA, clone:Y2G0138D13, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000031158, based on BLAT search P
AK215423.1 Mus musculus cDNA, clone:Y2G0134P18, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000031158, based on BLAT search P
AK210731.1 Mus musculus cDNA, clone:Y2G0119G10, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000031158, based on BLAT search P
AK164506.1 Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330016A05 product:phosphoribosyl pyrophosphate amidotransferase, full insert sequence P
AK159859.1 Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420035B20 product:phosphoribosyl pyrophosphate amidotransferase, full insert sequence P
AK148034.1 Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270148F17 product:phosphoribosyl pyrophosphate amidotransferase, full insert sequence P
AK159141.1 Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420004J05 product:phosphoribosyl pyrophosphate amidotransferase, full insert sequence P
AK167057.1 Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0029B01 product:phosphoribosyl pyrophosphate amidotransferase, full insert sequence P
AK147750.1 Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270023I21 product:phosphoribosyl pyrophosphate amidotransferase, full insert sequence P
AK160542.1 Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410018D02 product:phosphoribosyl pyrophosphate amidotransferase, full insert sequence P
AK017664.1 Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730454C12 product:inferred: amidophosphoribosyltransferase precursor {Rattus norvegicus}, full insert sequence
BC023841.1 Mus musculus phosphoribosyl pyrophosphate amidotransferase, mRNA (cDNA clone MGC:38417 IMAGE:5346105), complete cds PA

EST sequences (10 of 252) [Show all sequences]

CA574058.1 Clone NIA:K0609F03_IMAGE:30069662 bone marrow 5' read P
CA574211.1 Clone NIA:K0611H11_IMAGE:30069886 bone marrow 5' read P
BY032158.1 Clone I1C0010J07 embryonic tissue 5' read P
BY040075.1 Clone I730013N03 spleen 5' read P
BY042340.1 Clone I730024A07 thymus 5' read
BY053221.1 Clone I730072M16 mixed 5' read P
BY053247.1 Clone I730072N23 mixed 5' read P
BY053444.1 Clone I730073J20 thymus 5' read P
BY055889.1 Clone I730084B04 thymus 5' read P
BY056628.1 Clone I730089D06 spleen 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help