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UGID:299677     UniGene Mm.175403     Mus musculus (mouse)   Atl2
Atlastin GTPase 2 (Atl2)

Mouse protein-coding gene Atl2. Represented by 231 ESTs from 118 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 299677 - Mm.175403]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_062691.3 atlastin-2 isoform 1 M. musculus 100.0 582
XP_003908570.1 PREDICTED: atlastin-2 isoform 1 P. anubis 99.7 582
XP_001168056.1 PREDICTED: atlastin-2 isoform 5 P. troglodytes 99.7 582
XP_003639636.1 PREDICTED: atlastin-2-like isoform 1 C. lupus familiaris 99.7 582
XP_003481284.1 PREDICTED: atlastin-2-like isoform 2 S. scrofa 99.7 582
NP_001129145.1 atlastin-2 isoform 2 H. sapiens 99.3 582
NP_001086007.1 atlastin-2 X. laevis 90.5 568
NP_001103492.1 atl2 gene product D. rerio 84.5 534
NP_651274.1 atlastin, isoform A D. melanogaster 65.6 509
NP_001023493.1 Protein Y54G2A.2, isoform b C. elegans 63.6 495
Other hits (2 of 34) [Show all]SpeciesId(%)Len(aa)
NP_001094141.1 ADP-ribosylation factor-like 6 interacting protein 2 R. norvegicus 99.5 582
XP_002709960.1 PREDICTED: atlastin GTPase 2 isoform 2 O. cuniculus 99.5 582

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; mammary gland; fertilized ovum; kidney; ovary; heart; skin; pancreas; lymph node; bone marrow; thymus; eye; spleen; mixed; testis; bone; vagina; lung; intestine; bladder; spinal cord; muscle; uncharacterized tissue; pituitary gland; extraembryonic tissue; liver; adipose tissue; inner ear; prostate
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17 E3|17
UniSTS entry: Chr 17 RH124585
UniSTS entry: Ndufb11
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AK038697.1 Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230055O16 product:hypothetical Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain structure / hypothetical P-loop containing nucleotide tripho ... P
AK043907.1 Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830049L23 product:ADP-ribosylation factor-like 6 interacting protein 2, full insert sequence P
NM_178050.3 Mus musculus atlastin GTPase 2 (Atl2), transcript variant 2, mRNA P
BC060501.1 Mus musculus atlastin GTPase 2, mRNA (cDNA clone MGC:65383 IMAGE:5362692), complete cds PA
AK135988.1 Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420444F06 product:ADP-ribosylation factor-like 6 interacting protein 2, full insert sequence P
AK162077.1 Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420403P04 product:ADP-ribosylation factor-like 6 interacting protein 2, full insert sequence
AF133670.1 Mus musculus ARL-6 interacting protein-2 (Aip-2) mRNA, complete cds P
NM_019717.2 Mus musculus atlastin GTPase 2 (Atl2), transcript variant 1, mRNA P
AK008381.1 Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010110I21 product:hypothetical protein, full insert sequence P
BC006934.1 Mus musculus atlastin GTPase 2, mRNA (cDNA clone IMAGE:3602154), containing frame-shift errors PA

EST sequences (10 of 231) [Show all sequences]

CA749392.1 Clone IMAGE:6831589 brain 5' read
BY017584.1 Clone G830023F20 mammary gland 5' read P
BY021798.1 Clone G830049J20 mammary gland 5' read P
BY024099.1 Clone G930021G02 mammary gland 5' read P
BY050516.1 Clone I730060N11 spleen 5' read P
BY084251.1 Clone K630047H04 mixed 5' read P
BY102708.1 Clone K630147G07 intestine 5' read P
BY145436.1 Clone L930205A19 embryonic tissue 5' read P
BY244533.1 Clone K230051F03 brain 5' read P
BY245682.1 Clone K230057M12 brain 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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